MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:59436596-59536601

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Arih1	9	59388554 to 59486659	98105	-	protein coding gene	ariadne RBR E3 ubiquitin protein ligase 1
Tssr89941	9	59465090 to 59465106	16	-	TSS region	transcription start site region 89941
Tssr89942	9	59469114 to 59469118	4	-	TSS region	transcription start site region 89942
Rps11-ps1	9	59471759 to 59472233	474	-	pseudogene	ribosomal protein S11, pseudogene 1
Tssr89943	9	59472247 to 59472257	10	-	TSS region	transcription start site region 89943
Gm20199	9	59477745 to 59481741	3996	-	lncRNA gene	predicted gene, 20199
Cpgi21860	9	59485674 to 59487169	1495		CpG island	CpG island 21860
Tssr89944	9	59486323 to 59486415	92	-	TSS region	transcription start site region 89944
Tssr89945	9	59486437 to 59486480	43	-	TSS region	transcription start site region 89945
Tssr89946	9	59486581 to 59486590	9	-	TSS region	transcription start site region 89946
Tssr89947	9	59486596 to 59486601	5	-	TSS region	transcription start site region 89947
Tssr89948	9	59486610 to 59486621	11	-	TSS region	transcription start site region 89948
Tssr89949	9	59486647 to 59486679	32	-	TSS region	transcription start site region 89949
Tssr85425	9	59486745 to 59486767	22	+	TSS region	transcription start site region 85425
Gm33180	9	59499361 to 59512865	13504	-	lincRNA gene	predicted gene, 33180
Tmem202	9	59518671 to 59539674	21003	-	protein coding gene	transmembrane protein 202
Tssr89950	9	59525446 to 59525476	30	-	TSS region	transcription start site region 89950
Tssr89951	9	59530236 to 59530240	4	-	TSS region	transcription start site region 89951