Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:59401759-59542233

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arih1 9 59388554 to 59486659 98105 - protein coding gene ariadne RBR E3 ubiquitin protein ligase 1
Tssr89939 9 59404476 to 59404482 6 - TSS region transcription start site region 89939
Tssr89940 9 59410627 to 59410632 5 - TSS region transcription start site region 89940
D9Mit102 9 59423325 to 59423466 141 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 102
D9Ertd815e 9 59425689 to 59425927 238 DNA segment DNA segment, Chr 9, ERATO Doi 815, expressed
Tssr89941 9 59465090 to 59465106 16 - TSS region transcription start site region 89941
Tssr89942 9 59469114 to 59469118 4 - TSS region transcription start site region 89942
Rps11-ps1 9 59471759 to 59472233 474 - pseudogene ribosomal protein S11, pseudogene 1
Tssr89943 9 59472247 to 59472257 10 - TSS region transcription start site region 89943
Gm20199 9 59477745 to 59481741 3996 - lncRNA gene predicted gene, 20199
Cpgi21860 9 59485674 to 59487169 1495 CpG island CpG island 21860
Tssr89944 9 59486323 to 59486415 92 - TSS region transcription start site region 89944
Tssr89945 9 59486437 to 59486480 43 - TSS region transcription start site region 89945
Tssr89946 9 59486581 to 59486590 9 - TSS region transcription start site region 89946
Tssr89947 9 59486596 to 59486601 5 - TSS region transcription start site region 89947
Tssr89948 9 59486610 to 59486621 11 - TSS region transcription start site region 89948
Tssr89949 9 59486647 to 59486679 32 - TSS region transcription start site region 89949
Tssr85425 9 59486745 to 59486767 22 + TSS region transcription start site region 85425
Gm33180 9 59499361 to 59512865 13504 - lincRNA gene predicted gene, 33180
Tmem202 9 59518671 to 59539674 21003 - protein coding gene transmembrane protein 202
Tssr89950 9 59525446 to 59525476 30 - TSS region transcription start site region 89950
Tssr89951 9 59530236 to 59530240 4 - TSS region transcription start site region 89951
Cpgi21861 9 59539401 to 59540168 767 CpG island CpG island 21861
Hexa 9 59539545 to 59565109 25564 + protein coding gene hexosaminidase A
Tssr85426 9 59539643 to 59539717 74 + TSS region transcription start site region 85426
Tssr89952 9 59539919 to 59539988 69 - TSS region transcription start site region 89952
Tssr89953 9 59539989 to 59540005 16 - TSS region transcription start site region 89953
Tssr85427 9 59540925 to 59540955 30 + TSS region transcription start site region 85427
Tssr85428 9 59541834 to 59541860 26 + TSS region transcription start site region 85428