Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:58641543-58841580

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nptn	9	58582240 to 58652879	70639	+	protein coding gene	neuroplastin
D9Ertd167e	9	58646496 to 58646703	207		DNA segment	DNA segment, Chr 9, ERATO Doi 167, expressed
Tssr85410	9	58652034 to 58652088	54	+	TSS region	transcription start site region 85410
Tssr85411	9	58652418 to 58652448	30	+	TSS region	transcription start site region 85411
Rec114	9	58652856 to 58741563	88707	-	protein coding gene	REC114 meiotic recombination protein
Tssr85412	9	58653117 to 58653153	36	+	TSS region	transcription start site region 85412
Tssr89918	9	58657823 to 58657878	55	-	TSS region	transcription start site region 89918
Tssr89919	9	58657887 to 58657898	11	-	TSS region	transcription start site region 89919
A130026P03Rik	9	58666664 to 58668843	2179		unclassified gene	RIKEN cDNA A130026P03 gene
Gm20620	9	58695844 to 58696011	167	-	pseudogene	predicted gene 20620
Cpgi21852	9	58741396 to 58741680	284		CpG island	CpG island 21852
Tssr89920	9	58741543 to 58741580	37	-	TSS region	transcription start site region 89920
Gm21183	9	58750745 to 58751269	524	-	pseudogene	predicted gene, 21183
Tssr85413	9	58803525 to 58803537	12	+	TSS region	transcription start site region 85413
Cpgi21853	9	58805996 to 58806248	252		CpG island	CpG island 21853
Cpgi21854	9	58822051 to 58824609	2558		CpG island	CpG island 21854
Tssr85414	9	58822848 to 58822862	14	+	TSS region	transcription start site region 85414
Tssr85415	9	58822939 to 58822966	27	+	TSS region	transcription start site region 85415
Hcn4	9	58823512 to 58860955	37443	+	protein coding gene	hyperpolarization-activated, cyclic nucleotide-gated K+ 4