Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:58069321-58199343

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc33 9 58028677 to 58118823 90146 - protein coding gene coiled-coil domain containing 33
Stra6 9 58063788 to 58153996 90208 + protein coding gene stimulated by retinoic acid gene 6
Tssr85354 9 58079337 to 58079356 19 + TSS region transcription start site region 85354
Tssr85355 9 58079358 to 58079382 24 + TSS region transcription start site region 85355
Tssr89840 9 58094326 to 58094328 2 - TSS region transcription start site region 89840
Tssr89841 9 58102258 to 58102269 11 - TSS region transcription start site region 89841
Tssr89842 9 58102272 to 58102305 33 - TSS region transcription start site region 89842
Tssr89843 9 58102313 to 58102316 3 - TSS region transcription start site region 89843
1700120E02Rik 9 58102344 to 58103055 711 unclassified gene RIKEN cDNA 1700120E02 gene
Cpgi21838 9 58113416 to 58113709 293 CpG island CpG island 21838
Gm16131 9 58117815 to 58118989 1174 + antisense lncRNA gene predicted gene 16131
Tssr89844 9 58118818 to 58118832 14 - TSS region transcription start site region 89844
Tssr85356 9 58129062 to 58129068 6 + TSS region transcription start site region 85356
Tssr85357 9 58129321 to 58129338 17 + TSS region transcription start site region 85357
Tssr85358 9 58129476 to 58129484 8 + TSS region transcription start site region 85358
Tssr85359 9 58131888 to 58131902 14 + TSS region transcription start site region 85359
Tssr85360 9 58134040 to 58134070 30 + TSS region transcription start site region 85360
Tssr85361 9 58134204 to 58134228 24 + TSS region transcription start site region 85361
Tssr85362 9 58134242 to 58134258 16 + TSS region transcription start site region 85362
Tssr85363 9 58134264 to 58134271 7 + TSS region transcription start site region 85363
Tssr85364 9 58134274 to 58134281 7 + TSS region transcription start site region 85364
Tssr85365 9 58134288 to 58134300 12 + TSS region transcription start site region 85365
Tssr85366 9 58134321 to 58134343 22 + TSS region transcription start site region 85366
Tssr85367 9 58134353 to 58134360 7 + TSS region transcription start site region 85367
Tssr85368 9 58134718 to 58134735 17 + TSS region transcription start site region 85368
Tssr85369 9 58134804 to 58134823 19 + TSS region transcription start site region 85369
Tssr85370 9 58134879 to 58134891 12 + TSS region transcription start site region 85370
Tssr85371 9 58134895 to 58134900 5 + TSS region transcription start site region 85371
Tssr85372 9 58134910 to 58134931 21 + TSS region transcription start site region 85372
Tssr85373 9 58135015 to 58135029 14 + TSS region transcription start site region 85373
Tssr85374 9 58135044 to 58135078 34 + TSS region transcription start site region 85374
Tssr85375 9 58135080 to 58135102 22 + TSS region transcription start site region 85375
Tssr85376 9 58139550 to 58139554 4 + TSS region transcription start site region 85376
Islr 9 58156246 to 58159236 2990 - protein coding gene immunoglobulin superfamily containing leucine-rich repeat
Tssr89845 9 58156332 to 58156363 31 - TSS region transcription start site region 89845
Tssr89846 9 58158465 to 58158478 13 - TSS region transcription start site region 89846
Tssr89847 9 58158498 to 58158551 53 - TSS region transcription start site region 89847
Tssr89848 9 58159012 to 58159032 20 - TSS region transcription start site region 89848
Tssr89849 9 58159048 to 58159078 30 - TSS region transcription start site region 89849
Tssr89850 9 58159153 to 58159179 26 - TSS region transcription start site region 89850
Tssr89851 9 58159201 to 58159239 38 - TSS region transcription start site region 89851
Gm39344 9 58174444 to 58188312 13868 + lncRNA gene predicted gene, 39344
Gm47174 9 58192045 to 58192192 147 - unclassified gene predicted gene, 47174
Islr2 9 58196297 to 58204319 8022 - protein coding gene immunoglobulin superfamily containing leucine-rich repeat 2
Cpgi21839 9 58196582 to 58200020 3438 CpG island CpG island 21839
Tssr89852 9 58198432 to 58198470 38 - TSS region transcription start site region 89852
Tssr89853 9 58199121 to 58199132 11 - TSS region transcription start site region 89853