Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Fecq4 | 9 | 10266195 | QTL | fecundity QTL 4 | ||
Csk | 9 | 26985 | - | protein coding gene | c-src tyrosine kinase | |
Cpgi21828 | 9 | 1397 | CpG island | CpG island 21828 | ||
Tssr89802 | 9 | 11 | - | TSS region | transcription start site region 89802 | |
Tssr89803 | 9 | 26 | - | TSS region | transcription start site region 89803 | |
Tssr89804 | 9 | 19 | - | TSS region | transcription start site region 89804 | |
Tssr85319 | 9 | 18 | + | TSS region | transcription start site region 85319 | |
Tssr89805 | 9 | 11 | - | TSS region | transcription start site region 89805 | |
Tssr89806 | 9 | 9 | - | TSS region | transcription start site region 89806 | |
Tssr89807 | 9 | 111 | - | TSS region | transcription start site region 89807 | |
Tssr85320 | 9 | 4 | + | TSS region | transcription start site region 85320 | |
Tssr89808 | 9 | 19 | - | TSS region | transcription start site region 89808 | |
Tssr89809 | 9 | 23 | - | TSS region | transcription start site region 89809 | |
Tssr85321 | 9 | 23 | + | TSS region | transcription start site region 85321 | |
Tssr89810 | 9 | 24 | - | TSS region | transcription start site region 89810 | |
Tssr89811 | 9 | 15 | - | TSS region | transcription start site region 89811 | |
Cyp1a2 | 9 | 6718 | - | protein coding gene | cytochrome P450, family 1, subfamily a, polypeptide 2 | |
Tssr89812 | 9 | 5 | - | TSS region | transcription start site region 89812 | |
Tssr89813 | 9 | 9 | - | TSS region | transcription start site region 89813 | |
D9Mit101.2 | 9 | 174 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 101.2 | ||
D9Mit101 | 9 | 340 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 101 | ||
D9Mit101.1 | 9 | 138 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 101.1 | ||
Cpgi21829 | 9 | 441 | CpG island | CpG island 21829 | ||
Tssr89814 | 9 | 11 | - | TSS region | transcription start site region 89814 | |
Tssr89815 | 9 | 10 | - | TSS region | transcription start site region 89815 | |
Tssr89816 | 9 | 10 | - | TSS region | transcription start site region 89816 | |
Tssr89817 | 9 | 10 | - | TSS region | transcription start site region 89817 | |
Tssr89818 | 9 | 19 | - | TSS region | transcription start site region 89818 | |
Vmbic5 | 9 | 8239686 | QTL | ventral midbrain iron content 5 | ||
D9Mit21 | 9 | 190 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 21 | ||
Cyp1a1 | 9 | 15896 | + | protein coding gene | cytochrome P450, family 1, subfamily a, polypeptide 1 | |
Cpgi21830 | 9 | 986 | CpG island | CpG island 21830 | ||
Tssr85322 | 9 | 4 | + | TSS region | transcription start site region 85322 | |
D9Mit28 | 9 | 145 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 28 | ||
Cpgi21831 | 9 | 940 | CpG island | CpG island 21831 | ||
Tssr85323 | 9 | 74 | + | TSS region | transcription start site region 85323 | |
Edc3 | 9 | 41612 | + | protein coding gene | enhancer of mRNA decapping 3 | |
Tssr2887 | 9 | 10 | + | TSS region | transcription start site region 2887 | |
Tssr85324 | 9 | 30 | + | TSS region | transcription start site region 85324 | |
Clk3 | 9 | 15151 | - | protein coding gene | CDC-like kinase 3 | |
Tssr89819 | 9 | 4 | - | TSS region | transcription start site region 89819 | |
Tssr89820 | 9 | 3 | - | TSS region | transcription start site region 89820 | |
Tssr89821 | 9 | 18 | - | TSS region | transcription start site region 89821 | |
Tssr89822 | 9 | 12 | - | TSS region | transcription start site region 89822 | |
Cpgi21832 | 9 | 2159 | CpG island | CpG island 21832 | ||
Tssr85325 | 9 | 14 | + | TSS region | transcription start site region 85325 | |
Tssr89823 | 9 | 10 | - | TSS region | transcription start site region 89823 | |
Tssr89824 | 9 | 14 | - | TSS region | transcription start site region 89824 | |
Tssr89825 | 9 | 18 | - | TSS region | transcription start site region 89825 | |
Tssr89826 | 9 | 55 | - | TSS region | transcription start site region 89826 | |
Tssr85326 | 9 | 53 | + | TSS region | transcription start site region 85326 | |
Tssr85327 | 9 | 30 | + | TSS region | transcription start site region 85327 | |
Tssr89827 | 9 | 15 | - | TSS region | transcription start site region 89827 | |
Tssr89828 | 9 | 33 | - | TSS region | transcription start site region 89828 | |
Tssr89829 | 9 | 23 | - | TSS region | transcription start site region 89829 | |
Tssr89830 | 9 | 17 | - | TSS region | transcription start site region 89830 | |
Tssr89831 | 9 | 31 | - | TSS region | transcription start site region 89831 | |
Tssr89832 | 9 | 29 | - | TSS region | transcription start site region 89832 | |
Tssr89833 | 9 | 11 | - | TSS region | transcription start site region 89833 | |
Tssr89834 | 9 | 15 | - | TSS region | transcription start site region 89834 | |
Cpgi21833 | 9 | 264 | CpG island | CpG island 21833 | ||
Tssr85328 | 9 | 10 | + | TSS region | transcription start site region 85328 | |
Gm32510 | 9 | 2143 | + | lncRNA gene | predicted gene, 32510 | |
Tssr2888 | 9 | 4 | + | TSS region | transcription start site region 2888 | |
Tssr85329 | 9 | 38 | + | TSS region | transcription start site region 85329 | |
Gm17231 | 9 | 56430 | + | antisense lncRNA gene | predicted gene 17231 | |
Arid3b | 9 | 46440 | - | protein coding gene | AT rich interactive domain 3B (BRIGHT-like) | |
Tssr89835 | 9 | 22 | - | TSS region | transcription start site region 89835 | |
Tssr89836 | 9 | 27 | - | TSS region | transcription start site region 89836 | |
Tssr85330 | 9 | 27 | + | TSS region | transcription start site region 85330 | |
Tssr85331 | 9 | 12 | + | TSS region | transcription start site region 85331 | |
Cpgi21834 | 9 | 505 | CpG island | CpG island 21834 | ||
Cpgi21835 | 9 | 944 | CpG island | CpG island 21835 | ||
Tssr89837 | 9 | 92 | - | TSS region | transcription start site region 89837 | |
Gm7547 | 9 | 430 | - | pseudogene | predicted gene 7547 | |
Gm9715 | 9 | 873 | + | pseudogene | predicted gene 9715 | |
Neogq1 | 9 | 28342156 | QTL | neonatal growth QTL 1 | ||
Bbaa9 | 9 | 13676708 | QTL | B.burgdorferi-associated arthritis 9 | ||
Brm1 | 9 | 157 | QTL | brachyury modifier 1 | ||
D9Mit48 | 9 | 157 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 48 | ||
Cpgi21836 | 9 | 755 | CpG island | CpG island 21836 | ||
Tssr85332 | 9 | 17 | + | TSS region | transcription start site region 85332 | |
Tssr85333 | 9 | 24 | + | TSS region | transcription start site region 85333 | |
Tssr85334 | 9 | 10 | + | TSS region | transcription start site region 85334 | |
Tssr85335 | 9 | 49 | + | TSS region | transcription start site region 85335 | |
Ubl7 | 9 | 18989 | + | protein coding gene | ubiquitin-like 7 (bone marrow stromal cell-derived) | |
Tssr85336 | 9 | 11 | + | TSS region | transcription start site region 85336 | |
Tssr85337 | 9 | 11 | + | TSS region | transcription start site region 85337 | |
Tssr85338 | 9 | 1 | + | TSS region | transcription start site region 85338 | |
Tssr85339 | 9 | 13 | + | TSS region | transcription start site region 85339 | |
Tssr85340 | 9 | 11 | + | TSS region | transcription start site region 85340 | |
Tssr85341 | 9 | 32 | + | TSS region | transcription start site region 85341 | |
Tssr85342 | 9 | 18 | + | TSS region | transcription start site region 85342 | |
Tssr85343 | 9 | 14 | + | TSS region | transcription start site region 85343 | |
Cpgi21837 | 9 | 1739 | CpG island | CpG island 21837 | ||
Tssr85344 | 9 | 16 | + | TSS region | transcription start site region 85344 | |
Sema7a | 9 | 22730 | + | protein coding gene | sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A | |
Tssr89838 | 9 | 11 | - | TSS region | transcription start site region 89838 | |
Tssr85345 | 9 | 3 | + | TSS region | transcription start site region 85345 | |
Tssr85346 | 9 | 14 | + | TSS region | transcription start site region 85346 | |
Tssr85347 | 9 | 22 | + | TSS region | transcription start site region 85347 | |
Tssr85348 | 9 | 25 | + | TSS region | transcription start site region 85348 | |
Gm17322 | 9 | 588 | + | lincRNA gene | predicted gene, 17322 | |
Cyp11a1 | 9 | 20612 | + | protein coding gene | cytochrome P450, family 11, subfamily a, polypeptide 1 | |
Tssr85349 | 9 | 35 | + | TSS region | transcription start site region 85349 | |
Tssr85350 | 9 | 15 | + | TSS region | transcription start site region 85350 | |
Tssr85351 | 9 | 14 | + | TSS region | transcription start site region 85351 | |
Tssr85352 | 9 | 15 | + | TSS region | transcription start site region 85352 | |
Tssr89839 | 9 | 33 | - | TSS region | transcription start site region 89839 | |
Tssr85353 | 9 | 11 | + | TSS region | transcription start site region 85353 | |
Tssr2889 | 9 | 5 | + | TSS region | transcription start site region 2889 | |
Ccdc33 | 9 | 90146 | - | protein coding gene | coiled-coil domain containing 33 | |
Gm16130 | 9 | 16723 | + | antisense lncRNA gene | predicted gene 16130 | |
D9Mit141.1 | 9 | 116 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 141.1 | ||
D9Mit141 | 9 | 104 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 141 | ||
Stra6 | 9 | 90208 | + | protein coding gene | stimulated by retinoic acid gene 6 | |
Tssr85354 | 9 | 19 | + | TSS region | transcription start site region 85354 | |
Tssr85355 | 9 | 24 | + | TSS region | transcription start site region 85355 | |
Tssr89840 | 9 | 2 | - | TSS region | transcription start site region 89840 | |
Tssr89841 | 9 | 11 | - | TSS region | transcription start site region 89841 | |
Tssr89842 | 9 | 33 | - | TSS region | transcription start site region 89842 | |
Tssr89843 | 9 | 3 | - | TSS region | transcription start site region 89843 | |
1700120E02Rik | 9 | 711 | unclassified gene | RIKEN cDNA 1700120E02 gene | ||
Cpgi21838 | 9 | 293 | CpG island | CpG island 21838 | ||
Gm16131 | 9 | 1174 | + | antisense lncRNA gene | predicted gene 16131 | |
Tssr89844 | 9 | 14 | - | TSS region | transcription start site region 89844 | |
Tssr85356 | 9 | 6 | + | TSS region | transcription start site region 85356 | |
Tssr85357 | 9 | 17 | + | TSS region | transcription start site region 85357 | |
Tssr85358 | 9 | 8 | + | TSS region | transcription start site region 85358 | |
Tssr85359 | 9 | 14 | + | TSS region | transcription start site region 85359 | |
Tssr85360 | 9 | 30 | + | TSS region | transcription start site region 85360 | |
Tssr85361 | 9 | 24 | + | TSS region | transcription start site region 85361 | |
Tssr85362 | 9 | 16 | + | TSS region | transcription start site region 85362 | |
Tssr85363 | 9 | 7 | + | TSS region | transcription start site region 85363 | |
Tssr85364 | 9 | 7 | + | TSS region | transcription start site region 85364 | |
Tssr85365 | 9 | 12 | + | TSS region | transcription start site region 85365 | |
Tssr85366 | 9 | 22 | + | TSS region | transcription start site region 85366 | |
Tssr85367 | 9 | 7 | + | TSS region | transcription start site region 85367 | |
Tssr85368 | 9 | 17 | + | TSS region | transcription start site region 85368 | |
Tssr85369 | 9 | 19 | + | TSS region | transcription start site region 85369 | |
Tssr85370 | 9 | 12 | + | TSS region | transcription start site region 85370 | |
Tssr85371 | 9 | 5 | + | TSS region | transcription start site region 85371 | |
Tssr85372 | 9 | 21 | + | TSS region | transcription start site region 85372 | |
Tssr85373 | 9 | 14 | + | TSS region | transcription start site region 85373 | |
Tssr85374 | 9 | 34 | + | TSS region | transcription start site region 85374 | |
Tssr85375 | 9 | 22 | + | TSS region | transcription start site region 85375 | |
Tssr85376 | 9 | 4 | + | TSS region | transcription start site region 85376 | |
Islr | 9 | 2990 | - | protein coding gene | immunoglobulin superfamily containing leucine-rich repeat | |
Tssr89845 | 9 | 31 | - | TSS region | transcription start site region 89845 | |
Tssr89846 | 9 | 13 | - | TSS region | transcription start site region 89846 | |
Tssr89847 | 9 | 53 | - | TSS region | transcription start site region 89847 | |
Tssr89848 | 9 | 20 | - | TSS region | transcription start site region 89848 | |
Tssr89849 | 9 | 30 | - | TSS region | transcription start site region 89849 | |
Tssr89850 | 9 | 26 | - | TSS region | transcription start site region 89850 | |
Tssr89851 | 9 | 38 | - | TSS region | transcription start site region 89851 | |
Gm39344 | 9 | 13868 | + | lncRNA gene | predicted gene, 39344 | |
Gm47174 | 9 | 147 | - | unclassified gene | predicted gene, 47174 | |
Islr2 | 9 | 8022 | - | protein coding gene | immunoglobulin superfamily containing leucine-rich repeat 2 | |
Cpgi21839 | 9 | 3438 | CpG island | CpG island 21839 | ||
Tssr89852 | 9 | 38 | - | TSS region | transcription start site region 89852 | |
Tssr89853 | 9 | 11 | - | TSS region | transcription start site region 89853 | |
Tssr89854 | 9 | 16 | - | TSS region | transcription start site region 89854 | |
Tssr89855 | 9 | 23 | - | TSS region | transcription start site region 89855 | |
Tssr89856 | 9 | 11 | - | TSS region | transcription start site region 89856 | |
Tssr89857 | 9 | 21 | - | TSS region | transcription start site region 89857 | |
Cpgi21840 | 9 | 1316 | CpG island | CpG island 21840 | ||
Tssr89858 | 9 | 15 | - | TSS region | transcription start site region 89858 | |
Tssr89859 | 9 | 27 | - | TSS region | transcription start site region 89859 | |
Tssr89860 | 9 | 27 | - | TSS region | transcription start site region 89860 | |
Tssr89861 | 9 | 11 | - | TSS region | transcription start site region 89861 | |
Tssr89862 | 9 | 45 | - | TSS region | transcription start site region 89862 | |
Tssr89863 | 9 | 19 | - | TSS region | transcription start site region 89863 | |
Tssr89864 | 9 | 67 | - | TSS region | transcription start site region 89864 | |
Tssr89865 | 9 | 11 | - | TSS region | transcription start site region 89865 | |
Tssr89866 | 9 | 12 | - | TSS region | transcription start site region 89866 | |
Tssr89867 | 9 | 20 | - | TSS region | transcription start site region 89867 | |
Tssr89868 | 9 | 11 | - | TSS region | transcription start site region 89868 | |
Tssr89869 | 9 | 7 | - | TSS region | transcription start site region 89869 | |
Tssr89870 | 9 | 13 | - | TSS region | transcription start site region 89870 | |
Tssr89871 | 9 | 41 | - | TSS region | transcription start site region 89871 | |
Tssr89872 | 9 | 25 | - | TSS region | transcription start site region 89872 | |
Tssr89873 | 9 | 9 | - | TSS region | transcription start site region 89873 | |
Tssr89874 | 9 | 29 | - | TSS region | transcription start site region 89874 | |
Tssr89875 | 9 | 15 | - | TSS region | transcription start site region 89875 | |
Tssr89876 | 9 | 14 | - | TSS region | transcription start site region 89876 | |
Tssr89877 | 9 | 21 | - | TSS region | transcription start site region 89877 | |
Tssr89878 | 9 | 13 | - | TSS region | transcription start site region 89878 | |
Tssr89879 | 9 | 25 | - | TSS region | transcription start site region 89879 | |
Tssr85377 | 9 | 11 | + | TSS region | transcription start site region 85377 | |
1600029O15Rik | 9 | 5911 | + | pseudogene | RIKEN cDNA 1600029O15 gene | |
Tssr89880 | 9 | 20 | - | TSS region | transcription start site region 89880 | |
Cpgi21841 | 9 | 625 | CpG island | CpG island 21841 | ||
Tssr89881 | 9 | 17 | - | TSS region | transcription start site region 89881 | |
Tssr89882 | 9 | 5 | - | TSS region | transcription start site region 89882 | |
Pml | 9 | 31710 | - | protein coding gene | promyelocytic leukemia | |
Cpgi21842 | 9 | 234 | CpG island | CpG island 21842 | ||
Tssr89883 | 9 | 23 | - | TSS region | transcription start site region 89883 | |
Mir6385 | 9 | 104 | + | miRNA gene | microRNA 6385 | |
Tssr89884 | 9 | 15 | - | TSS region | transcription start site region 89884 | |
Tssr89885 | 9 | 4 | - | TSS region | transcription start site region 89885 |