Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:57559992-57646281

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21824 9 57560810 to 57561324 514 CpG island CpG island 21824
Tssr85314 9 57560934 to 57560989 55 + TSS region transcription start site region 85314
Scamp2 9 57560943 to 57588795 27852 + protein coding gene secretory carrier membrane protein 2
Tssr85315 9 57561001 to 57561012 11 + TSS region transcription start site region 85315
Cpgi21825 9 57589086 to 57589853 767 CpG island CpG island 21825
Tssr85316 9 57589442 to 57589482 40 + TSS region transcription start site region 85316
Ulk3 9 57589452 to 57596233 6781 + protein coding gene unc-51-like kinase 3
Tssr85317 9 57589485 to 57589498 13 + TSS region transcription start site region 85317
Tssr85318 9 57589508 to 57589566 58 + TSS region transcription start site region 85318
Cplx3 9 57599992 to 57606281 6289 - protein coding gene complexin 3
Feml2 9 57600000 to 63300000 5700000 QTL femur length in high growth mice 2
Cpgi21826 9 57605973 to 57606395 422 CpG island CpG island 21826
Tssr89797 9 57606194 to 57606205 11 - TSS region transcription start site region 89797
Tssr89798 9 57606234 to 57606260 26 - TSS region transcription start site region 89798
Gm32392 9 57606624 to 57616089 9465 + lncRNA gene predicted gene, 32392
Lman1l 9 57607085 to 57620774 13689 - protein coding gene lectin, mannose-binding 1 like
Tssr89799 9 57620760 to 57620778 18 - TSS region transcription start site region 89799
Csk 9 57626646 to 57653631 26985 - protein coding gene c-src tyrosine kinase
Tssr89800 9 57627027 to 57627072 45 - TSS region transcription start site region 89800
Cpgi21827 9 57640500 to 57640721 221 CpG island CpG island 21827
Tssr89801 9 57644237 to 57644240 3 - TSS region transcription start site region 89801
Cpgi21828 9 57644705 to 57646102 1397 CpG island CpG island 21828
Tssr89802 9 57645125 to 57645136 11 - TSS region transcription start site region 89802
Tssr89803 9 57645154 to 57645180 26 - TSS region transcription start site region 89803
Tssr89804 9 57645188 to 57645207 19 - TSS region transcription start site region 89804
Tssr85319 9 57645261 to 57645279 18 + TSS region transcription start site region 85319
Tssr89805 9 57645432 to 57645443 11 - TSS region transcription start site region 89805
Tssr89806 9 57645532 to 57645541 9 - TSS region transcription start site region 89806
Tssr89807 9 57645561 to 57645672 111 - TSS region transcription start site region 89807
Tssr85320 9 57645793 to 57645797 4 + TSS region transcription start site region 85320