MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:57554452-57631233

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi21824	9	57560810 to 57561324	514		CpG island	CpG island 21824
Tssr85314	9	57560934 to 57560989	55	+	TSS region	transcription start site region 85314
Scamp2	9	57560943 to 57588795	27852	+	protein coding gene	secretory carrier membrane protein 2
Tssr85315	9	57561001 to 57561012	11	+	TSS region	transcription start site region 85315
Cpgi21825	9	57589086 to 57589853	767		CpG island	CpG island 21825
Tssr85316	9	57589442 to 57589482	40	+	TSS region	transcription start site region 85316
Ulk3	9	57589452 to 57596233	6781	+	protein coding gene	unc-51-like kinase 3
Tssr85317	9	57589485 to 57589498	13	+	TSS region	transcription start site region 85317
Tssr85318	9	57589508 to 57589566	58	+	TSS region	transcription start site region 85318
Cplx3	9	57599992 to 57606281	6289	-	protein coding gene	complexin 3
Feml2	9	57600000 to 63300000	5700000		QTL	femur length in high growth mice 2
Cpgi21826	9	57605973 to 57606395	422		CpG island	CpG island 21826
Tssr89797	9	57606194 to 57606205	11	-	TSS region	transcription start site region 89797
Tssr89798	9	57606234 to 57606260	26	-	TSS region	transcription start site region 89798
Gm32392	9	57606624 to 57616089	9465	+	lncRNA gene	predicted gene, 32392
Lman1l	9	57607085 to 57620774	13689	-	protein coding gene	lectin, mannose-binding 1 like
Tssr89799	9	57620760 to 57620778	18	-	TSS region	transcription start site region 89799
Csk	9	57626646 to 57653631	26985	-	protein coding gene	c-src tyrosine kinase
Tssr89800	9	57627027 to 57627072	45	-	TSS region	transcription start site region 89800