Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Fecq4 | 9 | 10266195 | QTL | fecundity QTL 4 | ||
Tssr89773 | 9 | 1 | - | TSS region | transcription start site region 89773 | |
Tssr89774 | 9 | 11 | - | TSS region | transcription start site region 89774 | |
Cpgi21814 | 9 | 337 | CpG island | CpG island 21814 | ||
Tssr89775 | 9 | 11 | - | TSS region | transcription start site region 89775 | |
Tssr85297 | 9 | 9 | + | TSS region | transcription start site region 85297 | |
Tssr89776 | 9 | 23 | - | TSS region | transcription start site region 89776 | |
Gm39343 | 9 | 22050 | + | lncRNA gene | predicted gene, 39343 | |
D9Mit314 | 9 | 121 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology-314 | ||
Gm18996 | 9 | 754 | - | pseudogene | predicted gene, 18996 | |
Tssr85298 | 9 | 11 | + | TSS region | transcription start site region 85298 | |
Gm5121 | 9 | 626 | + | pseudogene | predicted gene 5121 | |
Ppcdc | 9 | 55029 | - | protein coding gene | phosphopantothenoylcysteine decarboxylase | |
4930430J02Rik | 9 | 9294 | + | lncRNA gene | RIKEN cDNA 4930430J02 gene | |
Tssr89777 | 9 | 51 | - | TSS region | transcription start site region 89777 | |
Tssr89778 | 9 | 13 | - | TSS region | transcription start site region 89778 | |
Tssr89779 | 9 | 24 | - | TSS region | transcription start site region 89779 | |
Tssr89780 | 9 | 11 | - | TSS region | transcription start site region 89780 | |
Tssr85299 | 9 | 15 | + | TSS region | transcription start site region 85299 | |
Tssr85300 | 9 | 11 | + | TSS region | transcription start site region 85300 | |
Tssr85301 | 9 | 11 | + | TSS region | transcription start site region 85301 | |
Tssr89781 | 9 | 11 | - | TSS region | transcription start site region 89781 | |
Tssr89782 | 9 | 16 | - | TSS region | transcription start site region 89782 | |
Tssr89783 | 9 | 26 | - | TSS region | transcription start site region 89783 | |
Cpgi21815 | 9 | 329 | CpG island | CpG island 21815 | ||
Tssr89784 | 9 | 45 | - | TSS region | transcription start site region 89784 | |
Scamp5 | 9 | 26733 | - | protein coding gene | secretory carrier membrane protein 5 | |
Tssr89785 | 9 | 16 | - | TSS region | transcription start site region 89785 | |
Tssr89786 | 9 | 10 | - | TSS region | transcription start site region 89786 | |
Tssr89787 | 9 | 31 | - | TSS region | transcription start site region 89787 | |
Tssr89788 | 9 | 11 | - | TSS region | transcription start site region 89788 | |
Tssr89789 | 9 | 32 | - | TSS region | transcription start site region 89789 | |
Tssr89790 | 9 | 36 | - | TSS region | transcription start site region 89790 | |
Tssr89791 | 9 | 14 | - | TSS region | transcription start site region 89791 | |
Cpgi21816 | 9 | 968 | CpG island | CpG island 21816 | ||
Tssr89792 | 9 | 89 | - | TSS region | transcription start site region 89792 | |
Tssr89793 | 9 | 34 | - | TSS region | transcription start site region 89793 | |
D9Wsu149 | 9 | 575 | + | pseudogene | DNA segment, Chr 9, Wayne State University 149 | |
Tssr85302 | 9 | 9 | + | TSS region | transcription start site region 85302 | |
Gm6166 | 9 | 408 | + | pseudogene | predicted gene 6166 | |
Gm18103 | 9 | 687 | + | pseudogene | predicted gene, 18103 | |
Cpgi21817 | 9 | 319 | CpG island | CpG island 21817 | ||
Cpgi21818 | 9 | 242 | CpG island | CpG island 21818 | ||
Cpgi21819 | 9 | 1175 | CpG island | CpG island 21819 | ||
Tssr85303 | 9 | 56 | + | TSS region | transcription start site region 85303 | |
Rpp25 | 9 | 1345 | + | protein coding gene | ribonuclease P/MRP 25 subunit | |
Tssr85304 | 9 | 31 | + | TSS region | transcription start site region 85304 | |
Tssr85305 | 9 | 30 | + | TSS region | transcription start site region 85305 | |
Tssr85306 | 9 | 31 | + | TSS region | transcription start site region 85306 | |
Cpgi21820 | 9 | 1075 | CpG island | CpG island 21820 | ||
Tssr85307 | 9 | 7 | + | TSS region | transcription start site region 85307 | |
Tssr85308 | 9 | 80 | + | TSS region | transcription start site region 85308 | |
Cox5a | 9 | 11152 | + | protein coding gene | cytochrome c oxidase subunit 5A | |
Tssr85309 | 9 | 9 | + | TSS region | transcription start site region 85309 | |
Tssr2886 | 9 | 1 | + | TSS region | transcription start site region 2886 | |
Tssr85310 | 9 | 9 | + | TSS region | transcription start site region 85310 | |
Gm26631 | 9 | 6342 | - | bidirectional promoter lncRNA gene | predicted gene, 26631 | |
Cpgi21821 | 9 | 879 | CpG island | CpG island 21821 | ||
Tssr85311 | 9 | 59 | + | TSS region | transcription start site region 85311 | |
Fam219b | 9 | 5656 | + | protein coding gene | family with sequence similarity 219, member B | |
Tssr85312 | 9 | 51 | + | TSS region | transcription start site region 85312 | |
Tssr85313 | 9 | 4 | + | TSS region | transcription start site region 85313 | |
Mpi | 9 | 8507 | - | protein coding gene | mannose phosphate isomerase | |
Tssr89794 | 9 | 8 | - | TSS region | transcription start site region 89794 | |
Cpgi21822 | 9 | 469 | CpG island | CpG island 21822 | ||
Tssr89795 | 9 | 35 | - | TSS region | transcription start site region 89795 | |
Tssr89796 | 9 | 11 | - | TSS region | transcription start site region 89796 | |
Cpgi21823 | 9 | 176 | CpG island | CpG island 21823 | ||
Cpgi21824 | 9 | 514 | CpG island | CpG island 21824 | ||
Tssr85314 | 9 | 55 | + | TSS region | transcription start site region 85314 | |
Scamp2 | 9 | 27852 | + | protein coding gene | secretory carrier membrane protein 2 | |
Tssr85315 | 9 | 11 | + | TSS region | transcription start site region 85315 | |
Cpgi21825 | 9 | 767 | CpG island | CpG island 21825 | ||
Tssr85316 | 9 | 40 | + | TSS region | transcription start site region 85316 | |
Ulk3 | 9 | 6781 | + | protein coding gene | unc-51-like kinase 3 | |
Tssr85317 | 9 | 13 | + | TSS region | transcription start site region 85317 | |
Tssr85318 | 9 | 58 | + | TSS region | transcription start site region 85318 | |
Cplx3 | 9 | 6289 | - | protein coding gene | complexin 3 | |
Feml2 | 9 | 5700000 | QTL | femur length in high growth mice 2 | ||
Cpgi21826 | 9 | 422 | CpG island | CpG island 21826 | ||
Tssr89797 | 9 | 11 | - | TSS region | transcription start site region 89797 | |
Tssr89798 | 9 | 26 | - | TSS region | transcription start site region 89798 | |
Gm32392 | 9 | 9465 | + | lncRNA gene | predicted gene, 32392 | |
Lman1l | 9 | 13689 | - | protein coding gene | lectin, mannose-binding 1 like | |
Tssr89799 | 9 | 18 | - | TSS region | transcription start site region 89799 | |
Csk | 9 | 26985 | - | protein coding gene | c-src tyrosine kinase | |
Tssr89800 | 9 | 45 | - | TSS region | transcription start site region 89800 | |
Cpgi21827 | 9 | 221 | CpG island | CpG island 21827 | ||
Tssr89801 | 9 | 3 | - | TSS region | transcription start site region 89801 | |
Cpgi21828 | 9 | 1397 | CpG island | CpG island 21828 | ||
Tssr89802 | 9 | 11 | - | TSS region | transcription start site region 89802 | |
Tssr89803 | 9 | 26 | - | TSS region | transcription start site region 89803 | |
Tssr89804 | 9 | 19 | - | TSS region | transcription start site region 89804 | |
Tssr85319 | 9 | 18 | + | TSS region | transcription start site region 85319 | |
Tssr89805 | 9 | 11 | - | TSS region | transcription start site region 89805 | |
Tssr89806 | 9 | 9 | - | TSS region | transcription start site region 89806 | |
Tssr89807 | 9 | 111 | - | TSS region | transcription start site region 89807 | |
Tssr85320 | 9 | 4 | + | TSS region | transcription start site region 85320 | |
Tssr89808 | 9 | 19 | - | TSS region | transcription start site region 89808 | |
Tssr89809 | 9 | 23 | - | TSS region | transcription start site region 89809 | |
Tssr85321 | 9 | 23 | + | TSS region | transcription start site region 85321 | |
Tssr89810 | 9 | 24 | - | TSS region | transcription start site region 89810 | |
Tssr89811 | 9 | 15 | - | TSS region | transcription start site region 89811 | |
Cyp1a2 | 9 | 6718 | - | protein coding gene | cytochrome P450, family 1, subfamily a, polypeptide 2 | |
Tssr89812 | 9 | 5 | - | TSS region | transcription start site region 89812 | |
Tssr89813 | 9 | 9 | - | TSS region | transcription start site region 89813 | |
D9Mit101.2 | 9 | 174 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 101.2 | ||
D9Mit101 | 9 | 340 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 101 | ||
D9Mit101.1 | 9 | 138 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 101.1 | ||
Cpgi21829 | 9 | 441 | CpG island | CpG island 21829 | ||
Tssr89814 | 9 | 11 | - | TSS region | transcription start site region 89814 | |
Tssr89815 | 9 | 10 | - | TSS region | transcription start site region 89815 | |
Tssr89816 | 9 | 10 | - | TSS region | transcription start site region 89816 | |
Tssr89817 | 9 | 10 | - | TSS region | transcription start site region 89817 | |
Tssr89818 | 9 | 19 | - | TSS region | transcription start site region 89818 | |
D9Mit21 | 9 | 190 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 21 | ||
Vmbic5 | 9 | 8239686 | QTL | ventral midbrain iron content 5 | ||
Cyp1a1 | 9 | 15896 | + | protein coding gene | cytochrome P450, family 1, subfamily a, polypeptide 1 | |
Cpgi21830 | 9 | 986 | CpG island | CpG island 21830 | ||
Tssr85322 | 9 | 4 | + | TSS region | transcription start site region 85322 | |
D9Mit28 | 9 | 145 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 28 | ||
Cpgi21831 | 9 | 940 | CpG island | CpG island 21831 | ||
Tssr85323 | 9 | 74 | + | TSS region | transcription start site region 85323 | |
Edc3 | 9 | 41612 | + | protein coding gene | enhancer of mRNA decapping 3 | |
Tssr2887 | 9 | 10 | + | TSS region | transcription start site region 2887 | |
Tssr85324 | 9 | 30 | + | TSS region | transcription start site region 85324 | |
Clk3 | 9 | 15151 | - | protein coding gene | CDC-like kinase 3 | |
Tssr89819 | 9 | 4 | - | TSS region | transcription start site region 89819 | |
Tssr89820 | 9 | 3 | - | TSS region | transcription start site region 89820 | |
Tssr89821 | 9 | 18 | - | TSS region | transcription start site region 89821 | |
Tssr89822 | 9 | 12 | - | TSS region | transcription start site region 89822 | |
Cpgi21832 | 9 | 2159 | CpG island | CpG island 21832 | ||
Tssr85325 | 9 | 14 | + | TSS region | transcription start site region 85325 | |
Tssr89823 | 9 | 10 | - | TSS region | transcription start site region 89823 | |
Tssr89824 | 9 | 14 | - | TSS region | transcription start site region 89824 | |
Tssr89825 | 9 | 18 | - | TSS region | transcription start site region 89825 | |
Tssr89826 | 9 | 55 | - | TSS region | transcription start site region 89826 | |
Tssr85326 | 9 | 53 | + | TSS region | transcription start site region 85326 | |
Tssr85327 | 9 | 30 | + | TSS region | transcription start site region 85327 | |
Tssr89827 | 9 | 15 | - | TSS region | transcription start site region 89827 | |
Tssr89828 | 9 | 33 | - | TSS region | transcription start site region 89828 | |
Tssr89829 | 9 | 23 | - | TSS region | transcription start site region 89829 | |
Tssr89830 | 9 | 17 | - | TSS region | transcription start site region 89830 | |
Tssr89831 | 9 | 31 | - | TSS region | transcription start site region 89831 | |
Tssr89832 | 9 | 29 | - | TSS region | transcription start site region 89832 | |
Tssr89833 | 9 | 11 | - | TSS region | transcription start site region 89833 | |
Tssr89834 | 9 | 15 | - | TSS region | transcription start site region 89834 | |
Cpgi21833 | 9 | 264 | CpG island | CpG island 21833 | ||
Tssr85328 | 9 | 10 | + | TSS region | transcription start site region 85328 | |
Gm32510 | 9 | 2143 | + | lncRNA gene | predicted gene, 32510 | |
Tssr2888 | 9 | 4 | + | TSS region | transcription start site region 2888 | |
Tssr85329 | 9 | 38 | + | TSS region | transcription start site region 85329 | |
Gm17231 | 9 | 56430 | + | antisense lncRNA gene | predicted gene 17231 | |
Arid3b | 9 | 46440 | - | protein coding gene | AT rich interactive domain 3B (BRIGHT-like) | |
Tssr89835 | 9 | 22 | - | TSS region | transcription start site region 89835 | |
Tssr89836 | 9 | 27 | - | TSS region | transcription start site region 89836 | |
Tssr85330 | 9 | 27 | + | TSS region | transcription start site region 85330 | |
Tssr85331 | 9 | 12 | + | TSS region | transcription start site region 85331 | |
Cpgi21834 | 9 | 505 | CpG island | CpG island 21834 | ||
Cpgi21835 | 9 | 944 | CpG island | CpG island 21835 | ||
Tssr89837 | 9 | 92 | - | TSS region | transcription start site region 89837 | |
Gm7547 | 9 | 430 | - | pseudogene | predicted gene 7547 | |
Gm9715 | 9 | 873 | + | pseudogene | predicted gene 9715 | |
Brm1 | 9 | 157 | QTL | brachyury modifier 1 | ||
Bbaa9 | 9 | 13676708 | QTL | B.burgdorferi-associated arthritis 9 | ||
D9Mit48 | 9 | 157 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 48 | ||
Neogq1 | 9 | 28342156 | QTL | neonatal growth QTL 1 | ||
Cpgi21836 | 9 | 755 | CpG island | CpG island 21836 | ||
Tssr85332 | 9 | 17 | + | TSS region | transcription start site region 85332 | |
Tssr85333 | 9 | 24 | + | TSS region | transcription start site region 85333 | |
Tssr85334 | 9 | 10 | + | TSS region | transcription start site region 85334 | |
Tssr85335 | 9 | 49 | + | TSS region | transcription start site region 85335 | |
Ubl7 | 9 | 18989 | + | protein coding gene | ubiquitin-like 7 (bone marrow stromal cell-derived) | |
Tssr85336 | 9 | 11 | + | TSS region | transcription start site region 85336 | |
Tssr85337 | 9 | 11 | + | TSS region | transcription start site region 85337 | |
Tssr85338 | 9 | 1 | + | TSS region | transcription start site region 85338 | |
Tssr85339 | 9 | 13 | + | TSS region | transcription start site region 85339 | |
Tssr85340 | 9 | 11 | + | TSS region | transcription start site region 85340 | |
Tssr85341 | 9 | 32 | + | TSS region | transcription start site region 85341 | |
Tssr85342 | 9 | 18 | + | TSS region | transcription start site region 85342 | |
Tssr85343 | 9 | 14 | + | TSS region | transcription start site region 85343 | |
Cpgi21837 | 9 | 1739 | CpG island | CpG island 21837 | ||
Tssr85344 | 9 | 16 | + | TSS region | transcription start site region 85344 | |
Sema7a | 9 | 22730 | + | protein coding gene | sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A | |
Tssr89838 | 9 | 11 | - | TSS region | transcription start site region 89838 | |
Tssr85345 | 9 | 3 | + | TSS region | transcription start site region 85345 | |
Tssr85346 | 9 | 14 | + | TSS region | transcription start site region 85346 | |
Tssr85347 | 9 | 22 | + | TSS region | transcription start site region 85347 | |
Tssr85348 | 9 | 25 | + | TSS region | transcription start site region 85348 | |
Gm17322 | 9 | 588 | + | lincRNA gene | predicted gene, 17322 | |
Cyp11a1 | 9 | 20612 | + | protein coding gene | cytochrome P450, family 11, subfamily a, polypeptide 1 | |
Tssr85349 | 9 | 35 | + | TSS region | transcription start site region 85349 | |
Tssr85350 | 9 | 15 | + | TSS region | transcription start site region 85350 | |
Tssr85351 | 9 | 14 | + | TSS region | transcription start site region 85351 | |
Tssr85352 | 9 | 15 | + | TSS region | transcription start site region 85352 | |
Tssr89839 | 9 | 33 | - | TSS region | transcription start site region 89839 | |
Tssr85353 | 9 | 11 | + | TSS region | transcription start site region 85353 | |
Tssr2889 | 9 | 5 | + | TSS region | transcription start site region 2889 | |
Ccdc33 | 9 | 90146 | - | protein coding gene | coiled-coil domain containing 33 | |
Gm16130 | 9 | 16723 | + | antisense lncRNA gene | predicted gene 16130 |