Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:57165751-57425762

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr85295 9 57175257 to 57175266 9 + TSS region transcription start site region 85295
Tssr85296 9 57175269 to 57175280 11 + TSS region transcription start site region 85296
1700041C23Rik 9 57175275 to 57186108 10833 + lincRNA gene RIKEN cDNA 1700041C23 gene
Gm46115 9 57202289 to 57203195 906 - lncRNA gene predicted gene, 46115
Tssr89765 9 57203073 to 57203086 13 - TSS region transcription start site region 89765
Trcg1 9 57236556 to 57249864 13308 + protein coding gene taste receptor cell gene 1
1700017B05Rik 9 57253117 to 57262612 9495 - protein coding gene RIKEN cDNA 1700017B05 gene
Cpgi21813 9 57261336 to 57262902 1566 CpG island CpG island 21813
Tssr89766 9 57261494 to 57261524 30 - TSS region transcription start site region 89766
Tssr89767 9 57261576 to 57261585 9 - TSS region transcription start site region 89767
Tssr89768 9 57261709 to 57261710 1 - TSS region transcription start site region 89768
Tssr2885 9 57261874 to 57261893 19 - TSS region transcription start site region 2885
Tssr89769 9 57261977 to 57261981 4 - TSS region transcription start site region 89769
Tssr89770 9 57262563 to 57262580 17 - TSS region transcription start site region 89770
Tssr89771 9 57262591 to 57262609 18 - TSS region transcription start site region 89771
Tssr89772 9 57262761 to 57262797 36 - TSS region transcription start site region 89772
Tssr89773 9 57265789 to 57265790 1 - TSS region transcription start site region 89773
Tssr89774 9 57265807 to 57265818 11 - TSS region transcription start site region 89774
Cpgi21814 9 57281632 to 57281969 337 CpG island CpG island 21814
Tssr89775 9 57295751 to 57295762 11 - TSS region transcription start site region 89775
Tssr85297 9 57296598 to 57296607 9 + TSS region transcription start site region 85297
Tssr89776 9 57299836 to 57299859 23 - TSS region transcription start site region 89776
Gm39343 9 57309567 to 57331617 22050 + lncRNA gene predicted gene, 39343
D9Mit314 9 57314406 to 57314527 121 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-314
Gm18996 9 57328661 to 57329415 754 - pseudogene predicted gene, 18996
Tssr85298 9 57334066 to 57334077 11 + TSS region transcription start site region 85298
Gm5121 9 57334128 to 57334754 626 + pseudogene predicted gene 5121
Ppcdc 9 57385095 to 57440124 55029 - protein coding gene phosphopantothenoylcysteine decarboxylase
4930430J02Rik 9 57391070 to 57400364 9294 + lncRNA gene RIKEN cDNA 4930430J02 gene
Tssr89777 9 57421320 to 57421371 51 - TSS region transcription start site region 89777
Tssr89778 9 57421373 to 57421386 13 - TSS region transcription start site region 89778