Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Scaper | 9 | 388240 | - | protein coding gene | S phase cyclin A-associated protein in the ER | |
Gm39342 | 9 | 5378 | - | lncRNA gene | predicted gene, 39342 | |
8430427G23Rik | 9 | 618 | unclassified gene | RIKEN cDNA 8430427G23 gene | ||
Gm46114 | 9 | 1532 | + | pseudogene | predicted gene, 46114 | |
1110019B24Rik | 9 | 1049 | unclassified gene | RIKEN cDNA 1110019B24 gene | ||
Cpgi21791 | 9 | 749 | CpG island | CpG island 21791 | ||
Tssr89684 | 9 | 50 | - | TSS region | transcription start site region 89684 | |
Tssr89685 | 9 | 28 | - | TSS region | transcription start site region 89685 | |
Tssr85222 | 9 | 42 | + | TSS region | transcription start site region 85222 | |
Tssr85223 | 9 | 31 | + | TSS region | transcription start site region 85223 | |
Tssr85224 | 9 | 9 | + | TSS region | transcription start site region 85224 | |
Gm7435 | 9 | 2466 | + | pseudogene | predicted gene 7435 | |
4930563M21Rik | 9 | 47961 | - | protein coding gene | RIKEN cDNA 4930563M21 gene | |
Gm7439 | 9 | 834 | + | pseudogene | predicted gene 7439 | |
Tssr89686 | 9 | 19 | - | TSS region | transcription start site region 89686 | |
Tssr85225 | 9 | 24 | + | TSS region | transcription start site region 85225 | |
Tssr85226 | 9 | 18 | + | TSS region | transcription start site region 85226 | |
Gm7444 | 9 | 2427 | + | pseudogene | predicted gene 7444 | |
Cpgi21792 | 9 | 833 | CpG island | CpG island 21792 | ||
Rcn2 | 9 | 17238 | + | protein coding gene | reticulocalbin 2 | |
Tssr85227 | 9 | 18 | + | TSS region | transcription start site region 85227 | |
Tssr85228 | 9 | 22 | + | TSS region | transcription start site region 85228 | |
Tssr85229 | 9 | 3 | + | TSS region | transcription start site region 85229 | |
Tssr85230 | 9 | 40 | + | TSS region | transcription start site region 85230 | |
Gm31261 | 9 | 3116 | - | lncRNA gene | predicted gene, 31261 | |
Tssr85231 | 9 | 12 | + | TSS region | transcription start site region 85231 | |
Pstpip1 | 9 | 38926 | + | protein coding gene | proline-serine-threonine phosphatase-interacting protein 1 | |
Tssr85232 | 9 | 21 | + | TSS region | transcription start site region 85232 | |
Tssr85233 | 9 | 19 | + | TSS region | transcription start site region 85233 | |
Tssr85234 | 9 | 45 | + | TSS region | transcription start site region 85234 | |
Tssr85235 | 9 | 14 | + | TSS region | transcription start site region 85235 | |
Tssr2880 | 9 | 5 | + | TSS region | transcription start site region 2880 | |
Tssr85236 | 9 | 15 | + | TSS region | transcription start site region 85236 | |
Tssr85237 | 9 | 28 | + | TSS region | transcription start site region 85237 | |
Tssr85238 | 9 | 16 | + | TSS region | transcription start site region 85238 | |
Tssr85239 | 9 | 26 | + | TSS region | transcription start site region 85239 | |
Tssr85240 | 9 | 31 | + | TSS region | transcription start site region 85240 | |
Tssr85241 | 9 | 11 | + | TSS region | transcription start site region 85241 | |
Tssr85242 | 9 | 13 | + | TSS region | transcription start site region 85242 | |
Tssr85243 | 9 | 36 | + | TSS region | transcription start site region 85243 | |
Tssr85244 | 9 | 11 | + | TSS region | transcription start site region 85244 | |
Tssr85245 | 9 | 4 | + | TSS region | transcription start site region 85245 | |
Tssr85246 | 9 | 12 | + | TSS region | transcription start site region 85246 | |
Tssr85247 | 9 | 11 | + | TSS region | transcription start site region 85247 | |
Tssr85248 | 9 | 16 | + | TSS region | transcription start site region 85248 | |
Tspan3 | 9 | 25186 | - | protein coding gene | tetraspanin 3 | |
Tssr89687 | 9 | 16 | - | TSS region | transcription start site region 89687 | |
Tssr89688 | 9 | 41 | - | TSS region | transcription start site region 89688 | |
Tssr89689 | 9 | 10 | - | TSS region | transcription start site region 89689 | |
Tssr89690 | 9 | 19 | - | TSS region | transcription start site region 89690 | |
Tssr89691 | 9 | 57 | - | TSS region | transcription start site region 89691 | |
Tssr89692 | 9 | 1 | - | TSS region | transcription start site region 89692 | |
Tssr89693 | 9 | 8 | - | TSS region | transcription start site region 89693 | |
Tssr2881 | 9 | 1 | + | TSS region | transcription start site region 2881 | |
Tssr89694 | 9 | 2 | - | TSS region | transcription start site region 89694 | |
Tssr2882 | 9 | 4 | + | TSS region | transcription start site region 2882 | |
Cpgi21793 | 9 | 915 | CpG island | CpG island 21793 | ||
Tssr89695 | 9 | 28 | - | TSS region | transcription start site region 89695 | |
Tssr89696 | 9 | 47 | - | TSS region | transcription start site region 89696 | |
Tssr89697 | 9 | 24 | - | TSS region | transcription start site region 89697 | |
Tssr2883 | 9 | 5 | - | TSS region | transcription start site region 2883 | |
Tssr85249 | 9 | 10 | + | TSS region | transcription start site region 85249 | |
Peak1 | 9 | 216941 | - | protein coding gene | pseudopodium-enriched atypical kinase 1 | |
Tssr89698 | 9 | 4 | - | TSS region | transcription start site region 89698 | |
Tssr89699 | 9 | 11 | - | TSS region | transcription start site region 89699 | |
Cpgi21794 | 9 | 448 | CpG island | CpG island 21794 | ||
Gm24270 | 9 | 56 | - | miRNA gene | predicted gene, 24270 | |
Gm29322 | 9 | 1466 | - | sense intronic lncRNA gene | predicted gene 29322 | |
Tssr89700 | 9 | 12 | - | TSS region | transcription start site region 89700 | |
Tssr89701 | 9 | 49 | - | TSS region | transcription start site region 89701 | |
Tssr85250 | 9 | 6 | + | TSS region | transcription start site region 85250 | |
Tssr85251 | 9 | 38 | + | TSS region | transcription start site region 85251 | |
Peak1os | 9 | 9890 | + | antisense lncRNA gene | pseudopodium-enriched atypical kinase 1, opposite strand | |
Tssr89702 | 9 | 28 | - | TSS region | transcription start site region 89702 | |
Gm37842 | 9 | 1568 | + | unclassified gene | predicted gene, 37842 | |
Tssr89703 | 9 | 6 | - | TSS region | transcription start site region 89703 | |
D9Mit142 | 9 | 181 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 142 | ||
Tssr89704 | 9 | 5 | - | TSS region | transcription start site region 89704 | |
Tssr89705 | 9 | 22 | - | TSS region | transcription start site region 89705 | |
Tssr89706 | 9 | 3 | - | TSS region | transcription start site region 89706 | |
Gm36940 | 9 | 2035 | - | unclassified gene | predicted gene, 36940 | |
Cpgi21795 | 9 | 1494 | CpG island | CpG island 21795 | ||
Tssr89707 | 9 | 29 | - | TSS region | transcription start site region 89707 | |
Tssr89708 | 9 | 20 | - | TSS region | transcription start site region 89708 | |
Tssr89709 | 9 | 11 | - | TSS region | transcription start site region 89709 | |
Tssr85252 | 9 | 12 | + | TSS region | transcription start site region 85252 | |
Tssr85253 | 9 | 10 | + | TSS region | transcription start site region 85253 | |
Tssr85254 | 9 | 57 | + | TSS region | transcription start site region 85254 | |
Hmg20a | 9 | 78308 | + | protein coding gene | high mobility group 20A | |
Tssr85255 | 9 | 12 | + | TSS region | transcription start site region 85255 | |
Tssr85256 | 9 | 42 | + | TSS region | transcription start site region 85256 | |
Tssr89710 | 9 | 11 | - | TSS region | transcription start site region 89710 | |
Tssr85257 | 9 | 7 | + | TSS region | transcription start site region 85257 | |
Tssr89711 | 9 | 35 | - | TSS region | transcription start site region 89711 | |
Tssr85258 | 9 | 4 | + | TSS region | transcription start site region 85258 | |
Tssr85259 | 9 | 3 | + | TSS region | transcription start site region 85259 | |
Tssr85260 | 9 | 9 | + | TSS region | transcription start site region 85260 | |
Gm2296 | 9 | 987 | + | pseudogene | predicted gene 2296 | |
Tssr85261 | 9 | 24 | + | TSS region | transcription start site region 85261 | |
5830432F11Rik | 9 | 1051 | unclassified gene | RIKEN cDNA 5830432F11 gene | ||
Tssr85262 | 9 | 18 | + | TSS region | transcription start site region 85262 | |
Spcq2 | 9 | 0 | QTL | sperm count QTL 2 | ||
Gm47175 | 9 | 1836 | - | unclassified gene | predicted gene, 47175 | |
Tssr89712 | 9 | 7 | - | TSS region | transcription start site region 89712 | |
Gm47176 | 9 | 327 | + | lincRNA gene | predicted gene, 47176 | |
Gm47178 | 9 | 341 | + | pseudogene | predicted gene, 47178 | |
Tssr89713 | 9 | 8 | - | TSS region | transcription start site region 89713 | |
Gm31529 | 9 | 6700 | - | lncRNA gene | predicted gene, 31529 | |
Gm26868 | 9 | 7780 | + | lincRNA gene | predicted gene, 26868 | |
Lingo1 | 9 | 177993 | - | protein coding gene | leucine rich repeat and Ig domain containing 1 |