Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:55544879-55943119

Filter by:
14 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Isl2 9 55538672 to 55546180 7508 + protein coding gene insulin related protein 2 (islet 2)
Cpgi21790 9 55544966 to 55546753 1787 CpG island CpG island 21790
Scaper 9 55549879 to 55938119 388240 - protein coding gene S phase cyclin A-associated protein in the ER
Gm23407 9 55555622 to 55555712 90 - snRNA gene predicted gene, 23407
Tssr89683 9 55590090 to 55590092 2 - TSS region transcription start site region 89683
Gm18102 9 55624648 to 55625267 619 + pseudogene predicted gene, 18102
Gm39342 9 55707190 to 55721153 13963 - lncRNA gene predicted gene, 39342
8430427G23Rik 9 55798211 to 55798829 618 - lncRNA gene RIKEN cDNA 8430427G23 gene
1110019B24Rik 9 55898957 to 55900006 1049 - lncRNA gene RIKEN cDNA 1110019B24 gene
Cpgi21791 9 55937701 to 55938450 749 CpG island CpG island 21791
Tssr89684 9 55938093 to 55938143 50 - TSS region transcription start site region 89684
Tssr89685 9 55938174 to 55938202 28 - TSS region transcription start site region 89685
Tssr85222 9 55938222 to 55938264 42 + TSS region transcription start site region 85222
Tssr85223 9 55938265 to 55938296 31 + TSS region transcription start site region 85223