Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:55049586-55209691

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47886 9 55054804 to 55055238 434 + pseudogene predicted gene, 47886
Gm47887 9 55064927 to 55067463 2536 - lincRNA gene predicted gene, 47887
Gm7395 9 55094329 to 55095370 1041 - pseudogene predicted gene 7395
D9Ertd496e 9 55116164 to 55116378 214 DNA segment DNA segment, Chr 9, ERATO Doi 496, expressed
D9Mit312 9 55129586 to 55129691 105 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 312
1700071A11Rik 9 55148480 to 55149398 918 unclassified gene RIKEN cDNA 1700071A11 gene
Cpgi21780 9 55148739 to 55150475 1736 CpG island CpG island 21780
Ube2q2 9 55148854 to 55207529 58675 + protein coding gene ubiquitin-conjugating enzyme E2Q family member 2
Tssr85198 9 55149300 to 55149312 12 + TSS region transcription start site region 85198
Tssr85199 9 55149364 to 55149395 31 + TSS region transcription start site region 85199
Tssr85200 9 55149413 to 55149432 19 + TSS region transcription start site region 85200
Tssr85201 9 55149434 to 55149448 14 + TSS region transcription start site region 85201
Tssr85202 9 55149453 to 55149469 16 + TSS region transcription start site region 85202
Tssr85203 9 55149603 to 55149606 3 + TSS region transcription start site region 85203
Tssr85204 9 55149621 to 55149630 9 + TSS region transcription start site region 85204
Tssr89670 9 55149969 to 55150016 47 - TSS region transcription start site region 89670
Tssr85205 9 55150050 to 55150083 33 + TSS region transcription start site region 85205
Pcho9 9 55192291 to 55192291 0 QTL plasma cholesterol 9
Arlsq2 9 55192291 to 55192291 0 QTL aortic root lesion size QTL 2
Arlsq1 9 55192291 to 55192291 0 QTL aortic root lesion size QTL 1
Tssr85206 9 55201583 to 55201589 6 + TSS region transcription start site region 85206
D9Wsu74e 9 55204728 to 55204976 248 DNA segment DNA segment, Chr 9, Wayne State University 74, expressed
Tssr89671 9 55204994 to 55204996 2 - TSS region transcription start site region 89671
Cpgi21781 9 55208526 to 55209646 1120 CpG island CpG island 21781
Fbxo22 9 55208935 to 55224433 15498 + protein coding gene F-box protein 22
Tssr85207 9 55208940 to 55208989 49 + TSS region transcription start site region 85207
Tssr85208 9 55209005 to 55209020 15 + TSS region transcription start site region 85208
Tssr2878 9 55209029 to 55209032 3 + TSS region transcription start site region 2878
Tssr85209 9 55209269 to 55209297 28 + TSS region transcription start site region 85209