Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:54936482-55026496

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hykk 9 54917290 to 54949924 32634 + protein coding gene hydroxylysine kinase 1
Tssr2877 9 54949349 to 54949358 9 + TSS region transcription start site region 2877
AY074887 9 54950244 to 54950954 710 - protein coding gene cDNA sequence AY074887
Cpgi21775 9 54950589 to 54951472 883 CpG island CpG island 21775
Tssr85192 9 54950782 to 54950797 15 + TSS region transcription start site region 85192
Tssr85193 9 54950808 to 54950820 12 + TSS region transcription start site region 85193
Psma4 9 54950816 to 54958032 7216 + protein coding gene proteasome (prosome, macropain) subunit, alpha type 4
Tssr85194 9 54950838 to 54950852 14 + TSS region transcription start site region 85194
Tssr85195 9 54951104 to 54951126 22 + TSS region transcription start site region 85195
Tssr85196 9 54956846 to 54956851 5 + TSS region transcription start site region 85196
Chrna5 9 54980880 to 55007779 26899 + protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 5
Cpgi21776 9 54980898 to 54982257 1359 CpG island CpG island 21776
Tssr85197 9 54981482 to 54981496 14 + TSS region transcription start site region 85197
Chrna3 9 55011343 to 55026559 15216 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 3
Cpgi21777 9 55015534 to 55015977 443 CpG island CpG island 21777
Cpgi21778 9 55025646 to 55026809 1163 CpG island CpG island 21778
Tssr89662 9 55026458 to 55026486 28 - TSS region transcription start site region 89662