Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:54699468-54769523

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21770 9 54698813 to 54700329 1516 CpG island CpG island 21770
Dnaja4 9 54698883 to 54716317 17434 + protein coding gene DnaJ heat shock protein family (Hsp40) member A4
Tssr85170 9 54699518 to 54699525 7 + TSS region transcription start site region 85170
Tssr85171 9 54699548 to 54699565 17 + TSS region transcription start site region 85171
Mir5710 9 54708313 to 54708381 68 + miRNA gene microRNA 5710
Wdr61 9 54717153 to 54734549 17396 - protein coding gene WD repeat domain 61
Cpgi21771 9 54734276 to 54734708 432 CpG island CpG island 21771
Tssr89656 9 54734468 to 54734523 55 - TSS region transcription start site region 89656
Cpgi21772 9 54764534 to 54766153 1619 CpG island CpG island 21772
Tssr85172 9 54764557 to 54764583 26 + TSS region transcription start site region 85172
Crabp1 9 54764748 to 54773110 8362 + protein coding gene cellular retinoic acid binding protein I
Tssr85173 9 54764794 to 54764813 19 + TSS region transcription start site region 85173
Tssr85174 9 54765552 to 54765564 12 + TSS region transcription start site region 85174
Tssr85175 9 54765629 to 54765640 11 + TSS region transcription start site region 85175
Tssr85176 9 54768441 to 54768451 10 + TSS region transcription start site region 85176