Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:54484120-54584127

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dmxl2	9	54365158 to 54501626	136468	-	protein coding gene	Dmx-like 2
Tssr89640	9	54489197 to 54489201	4	-	TSS region	transcription start site region 89640
Cpgi21765	9	54500964 to 54502253	1289		CpG island	CpG island 21765
Tssr89641	9	54501565 to 54501644	79	-	TSS region	transcription start site region 89641
Tssr89642	9	54501647 to 54501683	36	-	TSS region	transcription start site region 89642
Tssr89643	9	54501731 to 54501773	42	-	TSS region	transcription start site region 89643
Tssr89644	9	54501828 to 54501849	21	-	TSS region	transcription start site region 89644
Tssr89645	9	54501914 to 54501925	11	-	TSS region	transcription start site region 89645
Tssr85159	9	54534120 to 54534127	7	+	TSS region	transcription start site region 85159
Gm25980	9	54537185 to 54537402	217	+	unclassified non-coding RNA gene	predicted gene, 25980
Tssr85160	9	54538984 to 54538993	9	+	TSS region	transcription start site region 85160
Sh2d7	9	54538984 to 54545020	6036	+	protein coding gene	SH2 domain containing 7
Cib2	9	54545352 to 54560079	14727	-	protein coding gene	calcium and integrin binding family member 2
Tssr2875	9	54558777 to 54558815	38	-	TSS region	transcription start site region 2875
Cpgi21766	9	54559749 to 54560457	708		CpG island	CpG island 21766
Tssr89646	9	54560087 to 54560098	11	-	TSS region	transcription start site region 89646
Tssr89647	9	54560138 to 54560225	87	-	TSS region	transcription start site region 89647