MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:54221486-54406777

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cyp19a1	9	54165859 to 54229532	63673	-	protein coding gene	cytochrome P450, family 19, subfamily a, polypeptide 1
Tssr89629	9	54223793 to 54223796	3	-	TSS region	transcription start site region 89629
Tssr89630	9	54237259 to 54237266	7	-	TSS region	transcription start site region 89630
Adip20c	9	54242579 to 54286770	44191		QTL	adiposity 20c
Tssr89631	9	54249817 to 54249829	12	-	TSS region	transcription start site region 89631
Tssr85149	9	54249906 to 54249927	21	+	TSS region	transcription start site region 85149
Tssr85150	9	54262340 to 54262341	1	+	TSS region	transcription start site region 85150
Tssr85151	9	54266103 to 54266127	24	+	TSS region	transcription start site region 85151
Gldnos	9	54268580 to 54301570	32990	-	antisense lncRNA gene	gliomedin, opposite strand
Cpgi21764	9	54286275 to 54287062	787		CpG island	CpG island 21764
Tssr85152	9	54286332 to 54286343	11	+	TSS region	transcription start site region 85152
Tssr85153	9	54286389 to 54286398	9	+	TSS region	transcription start site region 85153
Tssr85154	9	54286479 to 54286494	15	+	TSS region	transcription start site region 85154
Gldn	9	54286486 to 54341777	55291	+	protein coding gene	gliomedin
Tssr85155	9	54328943 to 54328947	4	+	TSS region	transcription start site region 85155
Dmxl2	9	54365158 to 54501626	136468	-	protein coding gene	Dmx-like 2
Tssr89632	9	54392746 to 54392752	6	-	TSS region	transcription start site region 89632