Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:53646418-53897437

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adip20b 9 48789608 to 53884418 5094810 QTL adiposity 20b
Cul5 9 53614582 to 53667507 52925 - protein coding gene cullin 5
Tssr89611 9 53648717 to 53648721 4 - TSS region transcription start site region 89611
Cpgi21757 9 53666497 to 53667719 1222 CpG island CpG island 21757
Tssr89612 9 53667060 to 53667103 43 - TSS region transcription start site region 89612
Tssr85141 9 53667086 to 53667130 44 + TSS region transcription start site region 85141
Tssr85142 9 53667131 to 53667149 18 + TSS region transcription start site region 85142
Gm16124 9 53667246 to 53681265 14019 + antisense lncRNA gene predicted gene 16124
Tssr2874 9 53667407 to 53667418 11 - TSS region transcription start site region 2874
Tssr89613 9 53667429 to 53667521 92 - TSS region transcription start site region 89613
Rab39 9 53684110 to 53706232 22122 - protein coding gene RAB39, member RAS oncogene family
Rps6-ps3 9 53689534 to 53690283 749 - pseudogene ribosomal protein S6, pseudogene 3
Cpgi21758 9 53705590 to 53706707 1117 CpG island CpG island 21758
Tssr89614 9 53706211 to 53706251 40 - TSS region transcription start site region 89614
Gm48292 9 53746069 to 53748733 2664 + pseudogene predicted gene, 48292
Tssr85143 9 53771321 to 53771324 3 + TSS region transcription start site region 85143
Cpgi21759 9 53771418 to 53772437 1019 CpG island CpG island 21759
Tssr85144 9 53771499 to 53771535 36 + TSS region transcription start site region 85144
Slc35f2 9 53771538 to 53818154 46616 + protein coding gene solute carrier family 35, member F2
Tssr85145 9 53771646 to 53771663 17 + TSS region transcription start site region 85145
Tssr85146 9 53771675 to 53771687 12 + TSS region transcription start site region 85146
Tssr85147 9 53771700 to 53771782 82 + TSS region transcription start site region 85147
Tssr85148 9 53850243 to 53850257 14 + TSS region transcription start site region 85148
Sln 9 53850251 to 53853849 3598 + protein coding gene sarcolipin
Gm16380 9 53884084 to 53884561 477 + pseudogene predicted pseudogene 16380
Cpgi21760 9 53884392 to 53884595 203 CpG island CpG island 21760