Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:53416695-53656711

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930550C14Rik 9 53402325 to 53434402 32077 + protein coding gene RIKEN cDNA 4930550C14 gene
Atm 9 53439149 to 53536740 97591 - protein coding gene ataxia telangiectasia mutated
Cpgi21755 9 53536399 to 53537824 1425 CpG island CpG island 21755
Tssr89600 9 53536619 to 53536693 74 - TSS region transcription start site region 89600
Tssr89601 9 53536695 to 53536711 16 - TSS region transcription start site region 89601
Tssr89602 9 53536728 to 53536747 19 - TSS region transcription start site region 89602
Tssr89603 9 53536757 to 53536769 12 - TSS region transcription start site region 89603
Tssr85139 9 53537021 to 53537074 53 + TSS region transcription start site region 85139
Npat 9 53537047 to 53574342 37295 + protein coding gene nuclear protein in the AT region
Tssr85140 9 53537083 to 53537094 11 + TSS region transcription start site region 85140
1110050P16Rik 9 53567752 to 53569120 1368 unclassified gene RIKEN cDNA 1110050P16 gene
Gm9963 9 53574955 to 53577328 2373 unclassified gene predicted gene 9963
Acat1 9 53580522 to 53610350 29828 - protein coding gene acetyl-Coenzyme A acetyltransferase 1
Tssr89604 9 53592024 to 53592036 12 - TSS region transcription start site region 89604
Tssr89605 9 53592080 to 53592097 17 - TSS region transcription start site region 89605
Tssr89606 9 53594720 to 53594740 20 - TSS region transcription start site region 89606
Cpgi21756 9 53609961 to 53610638 677 CpG island CpG island 21756
Tssr89607 9 53610285 to 53610328 43 - TSS region transcription start site region 89607
Tssr89608 9 53610329 to 53610367 38 - TSS region transcription start site region 89608
Cul5 9 53614582 to 53667507 52925 - protein coding gene cullin 5
Tssr89609 9 53617357 to 53617362 5 - TSS region transcription start site region 89609
Tssr89610 9 53632693 to 53632704 11 - TSS region transcription start site region 89610
Gm22304 9 53639977 to 53640105 128 + snoRNA gene predicted gene, 22304
Tssr89611 9 53648717 to 53648721 4 - TSS region transcription start site region 89611