Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:53384149-53591740

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21753 9 53383887 to 53384715 828 CpG island CpG island 21753
Poglut3 9 53384025 to 53401867 17842 + protein coding gene protein O-glucosyltransferase 3
Mir130c 9 53400805 to 53400886 81 - miRNA gene microRNA 130c
4930550C14Rik 9 53402325 to 53434402 32077 + protein coding gene RIKEN cDNA 4930550C14 gene
Cpgi21754 9 53402568 to 53402732 164 CpG island CpG island 21754
Tssr85137 9 53403249 to 53403260 11 + TSS region transcription start site region 85137
Tssr89599 9 53404525 to 53404548 23 - TSS region transcription start site region 89599
Tssr85138 9 53405280 to 53405323 43 + TSS region transcription start site region 85138
Atm 9 53439149 to 53536740 97591 - protein coding gene ataxia telangiectasia mutated
Cpgi21755 9 53536399 to 53537824 1425 CpG island CpG island 21755
Tssr89600 9 53536619 to 53536693 74 - TSS region transcription start site region 89600
Tssr89601 9 53536695 to 53536711 16 - TSS region transcription start site region 89601
Tssr89602 9 53536728 to 53536747 19 - TSS region transcription start site region 89602
Tssr89603 9 53536757 to 53536769 12 - TSS region transcription start site region 89603
Tssr85139 9 53537021 to 53537074 53 + TSS region transcription start site region 85139
Npat 9 53537047 to 53574342 37295 + protein coding gene nuclear protein in the AT region
Tssr85140 9 53537083 to 53537094 11 + TSS region transcription start site region 85140
1110050P16Rik 9 53567752 to 53569120 1368 unclassified gene RIKEN cDNA 1110050P16 gene
Gm9963 9 53574955 to 53577328 2373 unclassified gene predicted gene 9963
Acat1 9 53580522 to 53610350 29828 - protein coding gene acetyl-Coenzyme A acetyltransferase 1