Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:52850598-53294081

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39339 9 52859671 to 52876162 16491 - lncRNA gene predicted gene, 39339
4932432N04Rik 9 53070598 to 53074081 3483 unclassified gene RIKEN cDNA 4932432N04 gene
Ddx10 9 53098635 to 53248053 149418 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
Tssr89594 9 53157328 to 53157340 12 - TSS region transcription start site region 89594
Gm47986 9 53164188 to 53164679 491 + pseudogene predicted gene, 47986
D9Mit334 9 53170792 to 53170915 123 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 334
Tssr89595 9 53178627 to 53178630 3 - TSS region transcription start site region 89595
Cpgi21750 9 53247512 to 53248430 918 CpG island CpG island 21750
Tssr89596 9 53248051 to 53248062 11 - TSS region transcription start site region 89596
Tssr89597 9 53248063 to 53248105 42 - TSS region transcription start site region 89597
Tssr89598 9 53248106 to 53248117 11 - TSS region transcription start site region 89598
Cpgi21751 9 53248847 to 53249028 181 CpG island CpG island 21751
4930510E17Rik 9 53264615 to 53280985 16370 + lincRNA gene RIKEN cDNA 4930510E17 gene
Tssr85118 9 53286050 to 53286054 4 + TSS region transcription start site region 85118