MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:52374967-52729584

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm47960	9	52399274 to 52401968	2694	-	lincRNA gene	predicted gene, 47960
Gm29692	9	52403258 to 52416443	13185	+	protein coding gene	predicted gene, 29692
Gm49389	9	52404299 to 52404815	516	+	pseudogene	predicted gene, 49389
Gm33125	9	52423576 to 52428381	4805	+	lincRNA gene	predicted gene, 33125
Hrtiq1	9	52514798 to 68648726	16133928		QTL	heart rate time index, QTL 1
Gm33210	9	52529967 to 52574584	44617	-	lncRNA gene	predicted gene, 33210
Tssr85115	9	52584778 to 52584784	6	+	TSS region	transcription start site region 85115
AI593442	9	52673042 to 52679780	6738	-	protein coding gene	expressed sequence AI593442
Tssr89588	9	52676795 to 52676808	13	-	TSS region	transcription start site region 89588
Tssr89589	9	52677863 to 52677874	11	-	TSS region	transcription start site region 89589
Cpgi21748	9	52677914 to 52679053	1139		CpG island	CpG island 21748
Cpgi21749	9	52679164 to 52679835	671		CpG island	CpG island 21749
Tssr89590	9	52679396 to 52679426	30	-	TSS region	transcription start site region 89590
Tssr89591	9	52679677 to 52679686	9	-	TSS region	transcription start site region 89591
Tssr89592	9	52679697 to 52679717	20	-	TSS region	transcription start site region 89592
Tssr89593	9	52679730 to 52679787	57	-	TSS region	transcription start site region 89593
Tssr85116	9	52679848 to 52679859	11	+	TSS region	transcription start site region 85116
Gm1715	9	52679863 to 52798772	118909	+	lincRNA gene	predicted gene 1715
Tssr85117	9	52683080 to 52683082	2	+	TSS region	transcription start site region 85117