Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:52080143-52150144

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rdx 9 52047173 to 52088735 41562 + protein coding gene radixin
Gm33614 9 52077590 to 52080334 2744 - pseudogene predicted gene, 33614
Tssr85111 9 52088236 to 52088275 39 + TSS region transcription start site region 85111
Gm27686 9 52103689 to 52103779 90 - miRNA gene predicted gene, 27686
Tssr85112 9 52104236 to 52104260 24 + TSS region transcription start site region 85112
Tssr89567 9 52110965 to 52110969 4 - TSS region transcription start site region 89567
Zc3h12c 9 52111344 to 52168572 57228 - protein coding gene zinc finger CCCH type containing 12C
Tssr89568 9 52112982 to 52113019 37 - TSS region transcription start site region 89568
Tssr85113 9 52115143 to 52115144 1 + TSS region transcription start site region 85113
Mir6244 9 52115623 to 52115739 116 + miRNA gene microRNA 6244
Etohc3 9 52123178 to 52123299 121 QTL ethanol consumption 3
Cocrb8 9 52123178 to 52123299 121 QTL cocaine related behavior 8
Tbdr1 9 52123178 to 52123299 121 QTL body temperature response to dietary restriction, QTL 1
Renf1 9 52123178 to 99910428 47787250 QTL renal failure 1
D9Mit4 9 52123178 to 52123299 121 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 4
Tssr89569 9 52125471 to 52125483 12 - TSS region transcription start site region 89569
Tssr89570 9 52127864 to 52127877 13 - TSS region transcription start site region 89570
Tssr89571 9 52141629 to 52141647 18 - TSS region transcription start site region 89571
Tssr89572 9 52141730 to 52141747 17 - TSS region transcription start site region 89572
Tssr89573 9 52141752 to 52141764 12 - TSS region transcription start site region 89573
Tssr89574 9 52143920 to 52143932 12 - TSS region transcription start site region 89574
Tssr89575 9 52149351 to 52149372 21 - TSS region transcription start site region 89575