MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:51173708-51280080

Filter by:

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr85080	9	51186117 to 51186163	46	+	TSS region	transcription start site region 85080
Tssr85081	9	51204852 to 51204857	5	+	TSS region	transcription start site region 85081
Tssr85082	9	51213537 to 51213562	25	+	TSS region	transcription start site region 85082
Tssr85083	9	51213683 to 51213697	14	+	TSS region	transcription start site region 85083
Pou2af1	9	51213708 to 51240080	26372	+	protein coding gene	POU domain, class 2, associating factor 1
Tssr85084	9	51213719 to 51213725	6	+	TSS region	transcription start site region 85084
Tssr85085	9	51214477 to 51214507	30	+	TSS region	transcription start site region 85085
Gm47828	9	51215733 to 51219521	3788	+	sense intronic lncRNA gene	predicted gene, 47828
Tssr89545	9	51216019 to 51216026	7	-	TSS region	transcription start site region 89545
Colca2	9	51270258 to 51278569	8311	-	protein coding gene	COLCA2 homolog
Tssr85086	9	51272886 to 51272891	5	+	TSS region	transcription start site region 85086
Tssr85087	9	51273800 to 51273816	16	+	TSS region	transcription start site region 85087
Tssr85088	9	51273823 to 51273836	13	+	TSS region	transcription start site region 85088
2010007H06Rik	9	51273942 to 51277602	3660	+	antisense lncRNA gene	RIKEN cDNA 2010007H06 gene
Tssr89546	9	51274896 to 51274911	15	-	TSS region	transcription start site region 89546
Cpgi21741	9	51278451 to 51279445	994		CpG island	CpG island 21741
Tssr89547	9	51278540 to 51278576	36	-	TSS region	transcription start site region 89547
Gm32819	9	51278990 to 51300421	21431	+	lncRNA gene	predicted gene, 32819