Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tdmq1 | 9 | 11389072 | QTL | type 2 diabetes modifying QTL 1 | ||
Tglq7 | 9 | 1400000 | QTL | triglyceride QTL 7 | ||
Dixdc1 | 9 | 76765 | - | protein coding gene | DIX domain containing 1 | |
D9Mit97 | 9 | 150 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 97 | ||
D9Mit27 | 9 | 174 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 27 | ||
Tssr89497 | 9 | 13 | - | TSS region | transcription start site region 89497 | |
Tssr89498 | 9 | 14 | - | TSS region | transcription start site region 89498 | |
Gm39337 | 9 | 19783 | + | lncRNA gene | predicted gene, 39337 | |
Cpgi21730 | 9 | 1007 | CpG island | CpG island 21730 | ||
Tssr89499 | 9 | 28 | - | TSS region | transcription start site region 89499 | |
Cpgi21731 | 9 | 1216 | CpG island | CpG island 21731 | ||
Tssr89500 | 9 | 87 | - | TSS region | transcription start site region 89500 | |
Tssr89501 | 9 | 12 | - | TSS region | transcription start site region 89501 | |
Tssr89502 | 9 | 21 | - | TSS region | transcription start site region 89502 | |
Tssr89503 | 9 | 10 | - | TSS region | transcription start site region 89503 | |
Cpgi21732 | 9 | 416 | CpG island | CpG island 21732 | ||
Tssr89504 | 9 | 14 | - | TSS region | transcription start site region 89504 | |
Tssr85047 | 9 | 3 | + | TSS region | transcription start site region 85047 | |
2310030G06Rik | 9 | 6830 | - | protein coding gene | RIKEN cDNA 2310030G06 gene | |
Tssr89505 | 9 | 19 | - | TSS region | transcription start site region 89505 | |
Tssr89506 | 9 | 96 | - | TSS region | transcription start site region 89506 | |
Hspb2 | 9 | 1276 | - | protein coding gene | heat shock protein 2 | |
Cryab | 9 | 5311 | + | protein coding gene | crystallin, alpha B | |
Tssr85048 | 9 | 28 | + | TSS region | transcription start site region 85048 | |
Cpgi21733 | 9 | 320 | CpG island | CpG island 21733 | ||
Tssr85049 | 9 | 11 | + | TSS region | transcription start site region 85049 | |
Tssr85050 | 9 | 29 | + | TSS region | transcription start site region 85050 | |
Tssr89507 | 9 | 12 | - | TSS region | transcription start site region 89507 | |
Tssr89508 | 9 | 47 | - | TSS region | transcription start site region 89508 | |
Tssr89509 | 9 | 25 | - | TSS region | transcription start site region 89509 | |
Tssr89510 | 9 | 11 | - | TSS region | transcription start site region 89510 | |
Tssr85051 | 9 | 8 | + | TSS region | transcription start site region 85051 | |
Tssr85052 | 9 | 185 | + | TSS region | transcription start site region 85052 | |
Tssr85053 | 9 | 5 | + | TSS region | transcription start site region 85053 | |
Tssr85054 | 9 | 6 | + | TSS region | transcription start site region 85054 | |
Tssr85055 | 9 | 9 | + | TSS region | transcription start site region 85055 | |
Tssr85056 | 9 | 4 | + | TSS region | transcription start site region 85056 | |
Tssr85057 | 9 | 3 | + | TSS region | transcription start site region 85057 | |
Tssr85058 | 9 | 21 | + | TSS region | transcription start site region 85058 | |
Tssr85059 | 9 | 42 | + | TSS region | transcription start site region 85059 | |
Tssr85060 | 9 | 6 | + | TSS region | transcription start site region 85060 | |
Tssr85061 | 9 | 3 | + | TSS region | transcription start site region 85061 | |
Tssr85062 | 9 | 14 | + | TSS region | transcription start site region 85062 | |
Tssr85063 | 9 | 3 | + | TSS region | transcription start site region 85063 | |
D9Mit96 | 9 | 190 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 96 | ||
repro46 | 9 | 6147917 | heritable phenotypic marker | reproductive mutant 46, JAX Reproductive Mutagenesis Program | ||
Tssr85064 | 9 | 12 | + | TSS region | transcription start site region 85064 | |
Tssr85065 | 9 | 16 | + | TSS region | transcription start site region 85065 | |
Tssr85066 | 9 | 7 | + | TSS region | transcription start site region 85066 | |
Tssr85067 | 9 | 17 | + | TSS region | transcription start site region 85067 | |
Tssr85068 | 9 | 16 | + | TSS region | transcription start site region 85068 | |
Tssr89511 | 9 | 50 | - | TSS region | transcription start site region 89511 | |
Tssr89512 | 9 | 4 | - | TSS region | transcription start site region 89512 | |
1110032A03Rik | 9 | 8574 | - | protein coding gene | RIKEN cDNA 1110032A03 gene | |
Tssr89513 | 9 | 7 | - | TSS region | transcription start site region 89513 | |
Tssr89514 | 9 | 19 | - | TSS region | transcription start site region 89514 | |
Tssr89515 | 9 | 8 | - | TSS region | transcription start site region 89515 | |
Tssr89516 | 9 | 5 | - | TSS region | transcription start site region 89516 | |
Cpgi21734 | 9 | 935 | CpG island | CpG island 21734 | ||
Tssr89517 | 9 | 77 | - | TSS region | transcription start site region 89517 | |
Tssr85069 | 9 | 43 | + | TSS region | transcription start site region 85069 | |
Fdxacb1 | 9 | 4432 | + | protein coding gene | ferredoxin-fold anticodon binding domain containing 1 | |
Gm38476 | 9 | 2998 | - | lncRNA gene | predicted gene, 38476 | |
Tssr85070 | 9 | 8 | + | TSS region | transcription start site region 85070 | |
Alg9 | 9 | 68523 | + | protein coding gene | asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) | |
Cpgi21735 | 9 | 1027 | CpG island | CpG island 21735 | ||
Tssr89518 | 9 | 24 | - | TSS region | transcription start site region 89518 | |
Tssr89519 | 9 | 31 | - | TSS region | transcription start site region 89519 | |
Tssr85071 | 9 | 48 | + | TSS region | transcription start site region 85071 | |
Tssr85072 | 9 | 22 | + | TSS region | transcription start site region 85072 | |
Tssr85073 | 9 | 5 | + | TSS region | transcription start site region 85073 | |
Tssr85074 | 9 | 12 | + | TSS region | transcription start site region 85074 | |
Tssr89520 | 9 | 5 | - | TSS region | transcription start site region 89520 | |
Tssr85075 | 9 | 27 | + | TSS region | transcription start site region 85075 | |
C130081A10Rik | 9 | 1453 | unclassified gene | RIKEN cDNA C130081A10 gene | ||
Cpgi21736 | 9 | 1140 | CpG island | CpG island 21736 | ||
Ppp2r1b | 9 | 42696 | + | protein coding gene | protein phosphatase 2, regulatory subunit A, beta | |
Tssr85076 | 9 | 49 | + | TSS region | transcription start site region 85076 | |
Tssr85077 | 9 | 10 | + | TSS region | transcription start site region 85077 | |
Gm25558 | 9 | 105 | + | snRNA gene | predicted gene, 25558 | |
Sik2 | 9 | 116272 | - | protein coding gene | salt inducible kinase 2 | |
D9Mit193 | 9 | 122 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 193 | ||
Tssr2870 | 9 | 25 | + | TSS region | transcription start site region 2870 | |
Tssr89521 | 9 | 4 | - | TSS region | transcription start site region 89521 | |
Cpgi21737 | 9 | 1474 | CpG island | CpG island 21737 | ||
Tssr89522 | 9 | 114 | - | TSS region | transcription start site region 89522 | |
Gm32681 | 9 | 22813 | + | lncRNA gene | predicted gene, 32681 | |
Layn | 9 | 22186 | - | protein coding gene | layilin | |
Tssr89523 | 9 | 17 | - | TSS region | transcription start site region 89523 | |
Tssr89524 | 9 | 2 | - | TSS region | transcription start site region 89524 | |
Tssr89525 | 9 | 21 | - | TSS region | transcription start site region 89525 | |
Tssr89526 | 9 | 18 | - | TSS region | transcription start site region 89526 | |
Tssr89527 | 9 | 11 | - | TSS region | transcription start site region 89527 | |
Tssr85078 | 9 | 17 | + | TSS region | transcription start site region 85078 | |
Tssr89528 | 9 | 18 | - | TSS region | transcription start site region 89528 | |
Cpgi21738 | 9 | 299 | CpG island | CpG island 21738 | ||
Tssr89529 | 9 | 32 | - | TSS region | transcription start site region 89529 | |
Tssr89530 | 9 | 36 | - | TSS region | transcription start site region 89530 | |
Tssr89531 | 9 | 11 | - | TSS region | transcription start site region 89531 | |
4833427G06Rik | 9 | 20765 | - | protein coding gene | RIKEN cDNA 4833427G06 gene | |
Cpgi21739 | 9 | 380 | CpG island | CpG island 21739 | ||
Tssr89532 | 9 | 10 | - | TSS region | transcription start site region 89532 | |
Tssr89533 | 9 | 38 | - | TSS region | transcription start site region 89533 | |
Tssr89534 | 9 | 9 | - | TSS region | transcription start site region 89534 | |
Tssr89535 | 9 | 9 | - | TSS region | transcription start site region 89535 | |
Tssr89536 | 9 | 23 | - | TSS region | transcription start site region 89536 | |
Tssr89537 | 9 | 5 | - | TSS region | transcription start site region 89537 | |
Btg4 | 9 | 17435 | + | protein coding gene | B cell translocation gene 4 | |
Mirc21 | 9 | 611 | complex/cluster/region | microRNA cluster 21, including Mir34c through Mir34b | ||
Mir34c | 9 | 76 | - | miRNA gene | microRNA 34c | |
Cpgi21740 | 9 | 637 | CpG island | CpG island 21740 | ||
Mir34b | 9 | 83 | - | miRNA gene | microRNA 34b | |
Tssr89538 | 9 | 13 | - | TSS region | transcription start site region 89538 | |
Tssr89539 | 9 | 19 | - | TSS region | transcription start site region 89539 | |
Tssr89540 | 9 | 14 | - | TSS region | transcription start site region 89540 | |
Tssr85079 | 9 | 7 | + | TSS region | transcription start site region 85079 | |
Gm32742 | 9 | 35210 | - | protein coding gene | predicted gene, 32742 | |
D9Mit258 | 9 | 115 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 258 | ||
Tssr89541 | 9 | 21 | - | TSS region | transcription start site region 89541 | |
Tssr89542 | 9 | 18 | - | TSS region | transcription start site region 89542 | |
Tssr89543 | 9 | 23 | - | TSS region | transcription start site region 89543 | |
Tssr89544 | 9 | 10 | - | TSS region | transcription start site region 89544 | |
Tssr85080 | 9 | 46 | + | TSS region | transcription start site region 85080 | |
Tssr85081 | 9 | 5 | + | TSS region | transcription start site region 85081 | |
Tssr85082 | 9 | 25 | + | TSS region | transcription start site region 85082 | |
Tssr85083 | 9 | 14 | + | TSS region | transcription start site region 85083 | |
Pou2af1 | 9 | 26372 | + | protein coding gene | POU domain, class 2, associating factor 1 | |
Tssr85084 | 9 | 6 | + | TSS region | transcription start site region 85084 | |
Tssr85085 | 9 | 30 | + | TSS region | transcription start site region 85085 | |
Gm47828 | 9 | 3788 | + | sense intronic lncRNA gene | predicted gene, 47828 | |
Tssr89545 | 9 | 7 | - | TSS region | transcription start site region 89545 | |
Colca2 | 9 | 8311 | - | protein coding gene | COLCA2 homolog | |
Tssr85086 | 9 | 5 | + | TSS region | transcription start site region 85086 | |
Tssr85087 | 9 | 16 | + | TSS region | transcription start site region 85087 | |
Tssr85088 | 9 | 13 | + | TSS region | transcription start site region 85088 | |
2010007H06Rik | 9 | 3660 | + | antisense lncRNA gene | RIKEN cDNA 2010007H06 gene | |
Tssr89546 | 9 | 15 | - | TSS region | transcription start site region 89546 | |
Cpgi21741 | 9 | 994 | CpG island | CpG island 21741 | ||
Tssr89547 | 9 | 36 | - | TSS region | transcription start site region 89547 | |
Gm32819 | 9 | 21431 | + | lncRNA gene | predicted gene, 32819 | |
1810046K07Rik | 9 | 39231 | - | protein coding gene | RIKEN cDNA 1810046K07 gene | |
Cpgi21742 | 9 | 281 | CpG island | CpG island 21742 | ||
Gm39338 | 9 | 57803 | + | lncRNA gene | predicted gene, 39338 | |
Tssr85089 | 9 | 6 | + | TSS region | transcription start site region 85089 | |
Tssr89548 | 9 | 19 | - | TSS region | transcription start site region 89548 | |
Tssr89549 | 9 | 25 | - | TSS region | transcription start site region 89549 | |
Tssr2871 | 9 | 5 | + | TSS region | transcription start site region 2871 | |
D9Mit230 | 9 | 124 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 230 | ||
Gm47854 | 9 | 33702 | - | lincRNA gene | predicted gene, 47854 | |
Gm7293 | 9 | 1006 | + | pseudogene | predicted gene 7293 | |
Tssr85090 | 9 | 1 | + | TSS region | transcription start site region 85090 | |
Gm8959 | 9 | 570 | + | pseudogene | predicted gene 8959 | |
Gm40520 | 9 | 12562 | - | lncRNA gene | predicted gene, 40520 | |
Cpgi21743 | 9 | 1552 | CpG island | CpG island 21743 | ||
Tssr85091 | 9 | 13 | + | TSS region | transcription start site region 85091 | |
Tssr85092 | 9 | 39 | + | TSS region | transcription start site region 85092 | |
Arhgap20 | 9 | 87707 | + | protein coding gene | Rho GTPase activating protein 20 | |
Tssr85093 | 9 | 7 | + | TSS region | transcription start site region 85093 | |
Cpgi21744 | 9 | 155 | CpG island | CpG island 21744 | ||
Arhgap20os | 9 | 36392 | - | antisense lncRNA gene | Rho GTPase activating protein 20, opposite strand | |
Tssr85094 | 9 | 11 | + | TSS region | transcription start site region 85094 | |
Tssr89550 | 9 | 8 | - | TSS region | transcription start site region 89550 | |
D9Mit1006 | 9 | 130 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 1006 | ||
Tssr85095 | 9 | 13 | + | TSS region | transcription start site region 85095 | |
4933407I05Rik | 9 | 12574 | + | lincRNA gene | RIKEN cDNA 4933407I05 gene | |
Tssr85096 | 9 | 28 | + | TSS region | transcription start site region 85096 | |
Gm6980 | 9 | 8698 | - | lincRNA gene | predicted gene 6980 | |
Fdx1 | 9 | 20250 | - | protein coding gene | ferredoxin 1 | |
Tssr89551 | 9 | 4 | - | TSS region | transcription start site region 89551 | |
Tssr89552 | 9 | 3 | - | TSS region | transcription start site region 89552 | |
Tssr89553 | 9 | 3 | - | TSS region | transcription start site region 89553 | |
Cpgi21745 | 9 | 912 | CpG island | CpG island 21745 | ||
Tssr85097 | 9 | 12 | + | TSS region | transcription start site region 85097 | |
Tssr89554 | 9 | 21 | - | TSS region | transcription start site region 89554 | |
Tssr89555 | 9 | 55 | - | TSS region | transcription start site region 89555 | |
Tssr89556 | 9 | 15 | - | TSS region | transcription start site region 89556 | |
Tssr89557 | 9 | 7 | - | TSS region | transcription start site region 89557 | |
Tssr89558 | 9 | 5 | - | TSS region | transcription start site region 89558 | |
Gm6981 | 9 | 1007 | - | pseudogene | predicted pseudogene 6981 | |
Tssr85098 | 9 | 11 | + | TSS region | transcription start site region 85098 | |
Rdx | 9 | 41562 | + | protein coding gene | radixin | |
Cpgi21746 | 9 | 1479 | CpG island | CpG island 21746 | ||
Tssr85099 | 9 | 30 | + | TSS region | transcription start site region 85099 | |
Tssr85100 | 9 | 23 | + | TSS region | transcription start site region 85100 | |
Tssr85101 | 9 | 29 | + | TSS region | transcription start site region 85101 | |
Tssr2872 | 9 | 46 | + | TSS region | transcription start site region 2872 | |
Tssr85102 | 9 | 11 | + | TSS region | transcription start site region 85102 | |
Tssr85103 | 9 | 73 | + | TSS region | transcription start site region 85103 | |
Tssr89559 | 9 | 7 | - | TSS region | transcription start site region 89559 | |
Tssr89560 | 9 | 11 | - | TSS region | transcription start site region 89560 | |
Tssr89561 | 9 | 13 | - | TSS region | transcription start site region 89561 | |
Tssr89562 | 9 | 18 | - | TSS region | transcription start site region 89562 | |
Tssr89563 | 9 | 11 | - | TSS region | transcription start site region 89563 | |
Tssr89564 | 9 | 15 | - | TSS region | transcription start site region 89564 | |
Tssr89565 | 9 | 7 | - | TSS region | transcription start site region 89565 | |
Tssr89566 | 9 | 9 | - | TSS region | transcription start site region 89566 | |
Tssr85104 | 9 | 10 | + | TSS region | transcription start site region 85104 | |
Tssr85105 | 9 | 7 | + | TSS region | transcription start site region 85105 | |
Tssr85106 | 9 | 5 | + | TSS region | transcription start site region 85106 | |
Tssr85107 | 9 | 15 | + | TSS region | transcription start site region 85107 |