Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:50579932-50739973

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il18 9 50554827 to 50581840 27013 + protein coding gene interleukin 18
Tssr2867 9 50593005 to 50593037 32 - TSS region transcription start site region 2867
Tssr89487 9 50593073 to 50593079 6 - TSS region transcription start site region 89487
Tssr85042 9 50593225 to 50593265 40 + TSS region transcription start site region 85042
Sdhd 9 50596357 to 50603812 7455 - protein coding gene succinate dehydrogenase complex, subunit D, integral membrane protein
Cpgi21727 9 50603287 to 50604437 1150 CpG island CpG island 21727
Tssr89488 9 50603792 to 50603824 32 - TSS region transcription start site region 89488
Tssr85043 9 50603892 to 50603903 11 + TSS region transcription start site region 85043
Tssr85044 9 50603907 to 50603952 45 + TSS region transcription start site region 85044
Timm8b 9 50603910 to 50605320 1410 + protein coding gene translocase of inner mitochondrial membrane 8B
Nkapd1 9 50605240 to 50617464 12224 - protein coding gene NKAP domain containing 1
Cpgi21728 9 50616565 to 50617612 1047 CpG island CpG island 21728
Tssr89489 9 50616880 to 50616932 52 - TSS region transcription start site region 89489
Tssr2868 9 50617004 to 50617020 16 - TSS region transcription start site region 2868
Tssr89490 9 50617228 to 50617289 61 - TSS region transcription start site region 89490
Tssr85045 9 50617308 to 50617361 53 + TSS region transcription start site region 85045
Pih1d2 9 50617321 to 50625000 7679 + protein coding gene PIH1 domain containing 2
Tssr89491 9 50617428 to 50617467 39 - TSS region transcription start site region 89491
Tssr85046 9 50617516 to 50617561 45 + TSS region transcription start site region 85046
Dlat 9 50634633 to 50659780 25147 - protein coding gene dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
Cpgi21729 9 50658980 to 50660083 1103 CpG island CpG island 21729
Tssr89492 9 50659464 to 50659477 13 - TSS region transcription start site region 89492
Tssr89493 9 50659481 to 50659488 7 - TSS region transcription start site region 89493
Tssr89494 9 50659493 to 50659564 71 - TSS region transcription start site region 89494
Tssr89495 9 50659570 to 50659573 3 - TSS region transcription start site region 89495
Tssr89496 9 50659790 to 50659801 11 - TSS region transcription start site region 89496
Tssr2869 9 50659932 to 50659973 41 - TSS region transcription start site region 2869
3110005L24Rik 9 50660015 to 50661527 1512 + lncRNA gene RIKEN cDNA 3110005L24 gene
Dixdc1 9 50662752 to 50739517 76765 - protein coding gene DIX domain containing 1
D9Mit27 9 50679791 to 50679965 174 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 27
D9Mit97 9 50679791 to 50679941 150 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 97
Tssr89497 9 50693780 to 50693793 13 - TSS region transcription start site region 89497
Tssr89498 9 50693800 to 50693814 14 - TSS region transcription start site region 89498
Gm39337 9 50697230 to 50717013 19783 + lncRNA gene predicted gene, 39337
Cpgi21730 9 50698431 to 50699438 1007 CpG island CpG island 21730
Tssr89499 9 50699000 to 50699028 28 - TSS region transcription start site region 89499
Cpgi21731 9 50727339 to 50728555 1216 CpG island CpG island 21731
Tssr89500 9 50727921 to 50728008 87 - TSS region transcription start site region 89500
Tssr89501 9 50728117 to 50728129 12 - TSS region transcription start site region 89501
Tssr89502 9 50728230 to 50728251 21 - TSS region transcription start site region 89502
Tssr89503 9 50728256 to 50728266 10 - TSS region transcription start site region 89503
Cpgi21732 9 50739136 to 50739552 416 CpG island CpG island 21732
Tssr89504 9 50739365 to 50739379 14 - TSS region transcription start site region 89504
Tssr85047 9 50739685 to 50739688 3 + TSS region transcription start site region 85047
2310030G06Rik 9 50739691 to 50746521 6830 - protein coding gene RIKEN cDNA 2310030G06 gene