Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:50510846-50591009

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pts 9 50521617 to 50528641 7024 - protein coding gene 6-pyruvoyl-tetrahydropterin synthase
Cpgi21725 9 50528213 to 50528876 663 CpG island CpG island 21725
Tssr89480 9 50528642 to 50528698 56 - TSS region transcription start site region 89480
Tssr85037 9 50528743 to 50528773 30 + TSS region transcription start site region 85037
Gm47077 9 50528767 to 50533752 4985 + antisense lncRNA gene predicted gene, 47077
Bco2 9 50533087 to 50555181 22094 - protein coding gene beta-carotene oxygenase 2
D9Mit70 9 50550846 to 50551009 163 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70
D9Mit70.1 9 50550899 to 50551028 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70.1
Il18 9 50554827 to 50581840 27013 + protein coding gene interleukin 18
Tssr85038 9 50554833 to 50554848 15 + TSS region transcription start site region 85038
Tssr85039 9 50554863 to 50554948 85 + TSS region transcription start site region 85039
Tssr89481 9 50555127 to 50555151 24 - TSS region transcription start site region 89481
Tssr89482 9 50555170 to 50555183 13 - TSS region transcription start site region 89482
Tex12 9 50557148 to 50561268 4120 - protein coding gene testis expressed 12
Cpgi21726 9 50560966 to 50561686 720 CpG island CpG island 21726
Tssr89483 9 50561261 to 50561268 7 - TSS region transcription start site region 89483
Tssr89484 9 50561282 to 50561301 19 - TSS region transcription start site region 89484
Tssr89485 9 50561305 to 50561316 11 - TSS region transcription start site region 89485
Tssr89486 9 50561320 to 50561331 11 - TSS region transcription start site region 89486
Tssr85040 9 50565337 to 50565376 39 + TSS region transcription start site region 85040
Tssr85041 9 50565382 to 50565427 45 + TSS region transcription start site region 85041