Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:50505337-50625376

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plet1 9 50494525 to 50505482 10957 + protein coding gene placenta expressed transcript 1
Tssr85036 9 50506395 to 50506398 3 + TSS region transcription start site region 85036
Tssr89479 9 50507754 to 50507765 11 - TSS region transcription start site region 89479
Pts 9 50521617 to 50528641 7024 - protein coding gene 6-pyruvoyl-tetrahydropterin synthase
Cpgi21725 9 50528213 to 50528876 663 CpG island CpG island 21725
Tssr89480 9 50528642 to 50528698 56 - TSS region transcription start site region 89480
Tssr85037 9 50528743 to 50528773 30 + TSS region transcription start site region 85037
Gm47077 9 50528767 to 50533752 4985 + antisense lncRNA gene predicted gene, 47077
Bco2 9 50533087 to 50555181 22094 - protein coding gene beta-carotene oxygenase 2
D9Mit70 9 50550846 to 50551009 163 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70
D9Mit70.1 9 50550899 to 50551028 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70.1
Il18 9 50554827 to 50581840 27013 + protein coding gene interleukin 18
Tssr85038 9 50554833 to 50554848 15 + TSS region transcription start site region 85038
Tssr85039 9 50554863 to 50554948 85 + TSS region transcription start site region 85039
Tssr89481 9 50555127 to 50555151 24 - TSS region transcription start site region 89481
Tssr89482 9 50555170 to 50555183 13 - TSS region transcription start site region 89482
Tex12 9 50557148 to 50561268 4120 - protein coding gene testis expressed 12
Cpgi21726 9 50560966 to 50561686 720 CpG island CpG island 21726
Tssr89483 9 50561261 to 50561268 7 - TSS region transcription start site region 89483
Tssr89484 9 50561282 to 50561301 19 - TSS region transcription start site region 89484
Tssr89485 9 50561305 to 50561316 11 - TSS region transcription start site region 89485
Tssr89486 9 50561320 to 50561331 11 - TSS region transcription start site region 89486
Tssr85040 9 50565337 to 50565376 39 + TSS region transcription start site region 85040
Tssr85041 9 50565382 to 50565427 45 + TSS region transcription start site region 85041
Tssr2867 9 50593005 to 50593037 32 - TSS region transcription start site region 2867
Tssr89487 9 50593073 to 50593079 6 - TSS region transcription start site region 89487
Tssr85042 9 50593225 to 50593265 40 + TSS region transcription start site region 85042
Sdhd 9 50596357 to 50603812 7455 - protein coding gene succinate dehydrogenase complex, subunit D, integral membrane protein
Cpgi21727 9 50603287 to 50604437 1150 CpG island CpG island 21727
Tssr89488 9 50603792 to 50603824 32 - TSS region transcription start site region 89488
Tssr85043 9 50603892 to 50603903 11 + TSS region transcription start site region 85043
Tssr85044 9 50603907 to 50603952 45 + TSS region transcription start site region 85044
Timm8b 9 50603910 to 50605320 1410 + protein coding gene translocase of inner mitochondrial membrane 8B
Nkapd1 9 50605240 to 50617464 12224 - protein coding gene NKAP domain containing 1
Cpgi21728 9 50616565 to 50617612 1047 CpG island CpG island 21728
Tssr89489 9 50616880 to 50616932 52 - TSS region transcription start site region 89489
Tssr2868 9 50617004 to 50617020 16 - TSS region transcription start site region 2868
Tssr89490 9 50617228 to 50617289 61 - TSS region transcription start site region 89490
Tssr85045 9 50617308 to 50617361 53 + TSS region transcription start site region 85045
Pih1d2 9 50617321 to 50625000 7679 + protein coding gene PIH1 domain containing 2
Tssr89491 9 50617428 to 50617467 39 - TSS region transcription start site region 89491
Tssr85046 9 50617516 to 50617561 45 + TSS region transcription start site region 85046