Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:50495127-50615151

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plet1os 9 50488799 to 50504805 16006 - antisense lncRNA gene placenta expressed transcript 1, opposite strand
Plet1 9 50494525 to 50505482 10957 + protein coding gene placenta expressed transcript 1
Tssr85026 9 50496776 to 50496801 25 + TSS region transcription start site region 85026
Cpgi21724 9 50498898 to 50499144 246 CpG island CpG island 21724
Tssr85027 9 50499144 to 50499164 20 + TSS region transcription start site region 85027
Tssr85028 9 50499174 to 50499186 12 + TSS region transcription start site region 85028
Tssr85029 9 50499209 to 50499222 13 + TSS region transcription start site region 85029
Tssr85030 9 50499254 to 50499266 12 + TSS region transcription start site region 85030
Tssr85031 9 50501065 to 50501091 26 + TSS region transcription start site region 85031
Tssr85032 9 50504286 to 50504297 11 + TSS region transcription start site region 85032
Tssr85033 9 50504305 to 50504346 41 + TSS region transcription start site region 85033
Tssr85034 9 50504349 to 50504367 18 + TSS region transcription start site region 85034
Tssr85035 9 50504552 to 50504566 14 + TSS region transcription start site region 85035
Tssr89478 9 50504779 to 50504821 42 - TSS region transcription start site region 89478
Tssr85036 9 50506395 to 50506398 3 + TSS region transcription start site region 85036
Tssr89479 9 50507754 to 50507765 11 - TSS region transcription start site region 89479
Pts 9 50521617 to 50528641 7024 - protein coding gene 6-pyruvoyl-tetrahydropterin synthase
Cpgi21725 9 50528213 to 50528876 663 CpG island CpG island 21725
Tssr89480 9 50528642 to 50528698 56 - TSS region transcription start site region 89480
Tssr85037 9 50528743 to 50528773 30 + TSS region transcription start site region 85037
Gm47077 9 50528767 to 50533752 4985 + antisense lncRNA gene predicted gene, 47077
Bco2 9 50533087 to 50555181 22094 - protein coding gene beta-carotene oxygenase 2
D9Mit70 9 50550846 to 50551009 163 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70
D9Mit70.1 9 50550899 to 50551028 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 70.1
Il18 9 50554827 to 50581840 27013 + protein coding gene interleukin 18
Tssr85038 9 50554833 to 50554848 15 + TSS region transcription start site region 85038
Tssr85039 9 50554863 to 50554948 85 + TSS region transcription start site region 85039
Tssr89481 9 50555127 to 50555151 24 - TSS region transcription start site region 89481
Tssr89482 9 50555170 to 50555183 13 - TSS region transcription start site region 89482
Tex12 9 50557148 to 50561268 4120 - protein coding gene testis expressed 12
Cpgi21726 9 50560966 to 50561686 720 CpG island CpG island 21726
Tssr89483 9 50561261 to 50561268 7 - TSS region transcription start site region 89483
Tssr89484 9 50561282 to 50561301 19 - TSS region transcription start site region 89484
Tssr89485 9 50561305 to 50561316 11 - TSS region transcription start site region 89485
Tssr89486 9 50561320 to 50561331 11 - TSS region transcription start site region 89486
Tssr85040 9 50565337 to 50565376 39 + TSS region transcription start site region 85040
Tssr85041 9 50565382 to 50565427 45 + TSS region transcription start site region 85041
Tssr2867 9 50593005 to 50593037 32 - TSS region transcription start site region 2867
Tssr89487 9 50593073 to 50593079 6 - TSS region transcription start site region 89487
Tssr85042 9 50593225 to 50593265 40 + TSS region transcription start site region 85042
Sdhd 9 50596357 to 50603812 7455 - protein coding gene succinate dehydrogenase complex, subunit D, integral membrane protein
Cpgi21727 9 50603287 to 50604437 1150 CpG island CpG island 21727
Tssr89488 9 50603792 to 50603824 32 - TSS region transcription start site region 89488
Tssr85043 9 50603892 to 50603903 11 + TSS region transcription start site region 85043
Tssr85044 9 50603907 to 50603952 45 + TSS region transcription start site region 85044
Timm8b 9 50603910 to 50605320 1410 + protein coding gene translocase of inner mitochondrial membrane 8B
Nkapd1 9 50605240 to 50617464 12224 - protein coding gene NKAP domain containing 1