Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lmr2 | 9 | 13167730 | QTL | leishmaniasis resistance 2 | ||
Ncam1 | 9 | 296789 | - | protein coding gene | neural cell adhesion molecule 1 | |
Gm11149 | 9 | 49737 | + | antisense lncRNA gene | predicted gene 11149 | |
Tssr89455 | 9 | 36 | - | TSS region | transcription start site region 89455 | |
Tssr89456 | 9 | 15 | - | TSS region | transcription start site region 89456 | |
Tssr89457 | 9 | 26 | - | TSS region | transcription start site region 89457 | |
D9Mit171 | 9 | 249 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 171 | ||
Hts | 9 | 249 | QTL | hypothermia sensitivity | ||
Tssr89458 | 9 | 3 | - | TSS region | transcription start site region 89458 | |
Tssr89459 | 9 | 2 | - | TSS region | transcription start site region 89459 | |
Tssr89460 | 9 | 11 | - | TSS region | transcription start site region 89460 | |
Tssr89461 | 9 | 27 | - | TSS region | transcription start site region 89461 | |
Tssr89462 | 9 | 21 | - | TSS region | transcription start site region 89462 | |
Tssr89463 | 9 | 5 | - | TSS region | transcription start site region 89463 | |
Tssr89464 | 9 | 3 | - | TSS region | transcription start site region 89464 | |
Tssr89465 | 9 | 4 | - | TSS region | transcription start site region 89465 | |
D9Mit46 | 9 | 113 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 46 | ||
Tssr89466 | 9 | 4 | - | TSS region | transcription start site region 89466 | |
Cpgi21723 | 9 | 2506 | CpG island | CpG island 21723 | ||
Tssr89467 | 9 | 34 | - | TSS region | transcription start site region 89467 | |
Tssr89468 | 9 | 26 | - | TSS region | transcription start site region 89468 | |
Tssr2865 | 9 | 11 | - | TSS region | transcription start site region 2865 | |
Gm25633 | 9 | 106 | - | snRNA gene | predicted gene, 25633 | |
D9Mit131.1 | 9 | 146 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131.1 | ||
D9Mit131 | 9 | 147 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131 | ||
D9Mit131.2 | 9 | 109 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131.2 | ||
Tssr85018 | 9 | 23 | + | TSS region | transcription start site region 85018 | |
Gm47543 | 9 | 1676 | + | lincRNA gene | predicted gene, 47543 | |
Tssr85019 | 9 | 7 | + | TSS region | transcription start site region 85019 | |
Tssr85020 | 9 | 9 | + | TSS region | transcription start site region 85020 | |
D9Mit162.1 | 9 | 200 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 162.1 | ||
D9Mit162 | 9 | 134 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 162 | ||
Ptnu3 | 9 | 134 | QTL | proteinuria 3 | ||
Tssr89469 | 9 | 14 | - | TSS region | transcription start site region 89469 | |
Gm8907 | 9 | 1002 | - | pseudogene | predicted gene 8907 | |
Si5lq3 | 9 | 115 | QTL | serum IGFBP-5 level QTL 3 | ||
D9Mit71 | 9 | 115 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 71 | ||
repro36 | 9 | 10294689 | heritable phenotypic marker | reproductive mutant 36, JAX Reproductive Mutagenesis Program | ||
Tglq7 | 9 | 1400000 | QTL | triglyceride QTL 7 | ||
Gm4042 | 9 | 626 | + | pseudogene | predicted gene 4042 | |
2310003N18Rik | 9 | 659 | - | lincRNA gene | RIKEN cDNA 2310003N18 gene | |
Tssr89470 | 9 | 4 | - | TSS region | transcription start site region 89470 | |
Gm40519 | 9 | 7785 | - | lncRNA gene | predicted gene, 40519 | |
Tssr85021 | 9 | 1 | + | TSS region | transcription start site region 85021 | |
D9Mit288 | 9 | 96 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 288 | ||
Gm39336 | 9 | 1033 | - | lincRNA gene | predicted gene, 39336 | |
Rpl10-ps3 | 9 | 758 | - | pseudogene | ribosomal protein L10, pseudogene 3 | |
Tssr89471 | 9 | 2 | - | TSS region | transcription start site region 89471 | |
Gm38579 | 9 | 1549 | - | lncRNA gene | predicted gene, 38579 | |
D9Mit172 | 9 | 141 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 172 | ||
Tssr89472 | 9 | 12 | - | TSS region | transcription start site region 89472 | |
Tssr89473 | 9 | 17 | - | TSS region | transcription start site region 89473 | |
Tssr89474 | 9 | 22 | - | TSS region | transcription start site region 89474 | |
Gm32462 | 9 | 13936 | - | lncRNA gene | predicted gene, 32462 | |
Tssr89475 | 9 | 18 | - | TSS region | transcription start site region 89475 | |
Tssr85022 | 9 | 2 | + | TSS region | transcription start site region 85022 | |
Tssr89476 | 9 | 9 | - | TSS region | transcription start site region 89476 | |
Tssr89477 | 9 | 10 | - | TSS region | transcription start site region 89477 | |
Gm9557 | 9 | 1481 | + | pseudogene | predicted gene 9557 | |
Plet1os | 9 | 16006 | - | antisense lncRNA gene | placenta expressed transcript 1, opposite strand | |
Tssr2866 | 9 | 9 | + | TSS region | transcription start site region 2866 | |
Tssr85023 | 9 | 7 | + | TSS region | transcription start site region 85023 | |
Tssr85024 | 9 | 39 | + | TSS region | transcription start site region 85024 | |
Tssr85025 | 9 | 17 | + | TSS region | transcription start site region 85025 | |
Plet1 | 9 | 10957 | + | protein coding gene | placenta expressed transcript 1 | |
Tssr85026 | 9 | 25 | + | TSS region | transcription start site region 85026 | |
Cpgi21724 | 9 | 246 | CpG island | CpG island 21724 | ||
Tssr85027 | 9 | 20 | + | TSS region | transcription start site region 85027 | |
Tssr85028 | 9 | 12 | + | TSS region | transcription start site region 85028 | |
Tssr85029 | 9 | 13 | + | TSS region | transcription start site region 85029 | |
Tssr85030 | 9 | 12 | + | TSS region | transcription start site region 85030 | |
Tssr85031 | 9 | 26 | + | TSS region | transcription start site region 85031 | |
Tssr85032 | 9 | 11 | + | TSS region | transcription start site region 85032 | |
Tssr85033 | 9 | 41 | + | TSS region | transcription start site region 85033 | |
Tssr85034 | 9 | 18 | + | TSS region | transcription start site region 85034 | |
Tssr85035 | 9 | 14 | + | TSS region | transcription start site region 85035 | |
Tssr89478 | 9 | 42 | - | TSS region | transcription start site region 89478 | |
Tssr85036 | 9 | 3 | + | TSS region | transcription start site region 85036 | |
Tssr89479 | 9 | 11 | - | TSS region | transcription start site region 89479 | |
Pts | 9 | 7024 | - | protein coding gene | 6-pyruvoyl-tetrahydropterin synthase | |
Cpgi21725 | 9 | 663 | CpG island | CpG island 21725 | ||
Tssr89480 | 9 | 56 | - | TSS region | transcription start site region 89480 | |
Tssr85037 | 9 | 30 | + | TSS region | transcription start site region 85037 | |
Gm47077 | 9 | 4985 | + | antisense lncRNA gene | predicted gene, 47077 | |
Bco2 | 9 | 22094 | - | protein coding gene | beta-carotene oxygenase 2 | |
D9Mit70 | 9 | 163 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 70 | ||
D9Mit70.1 | 9 | 129 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 70.1 | ||
Il18 | 9 | 27013 | + | protein coding gene | interleukin 18 | |
Tssr85038 | 9 | 15 | + | TSS region | transcription start site region 85038 | |
Tssr85039 | 9 | 85 | + | TSS region | transcription start site region 85039 | |
Tssr89481 | 9 | 24 | - | TSS region | transcription start site region 89481 | |
Tssr89482 | 9 | 13 | - | TSS region | transcription start site region 89482 | |
Tex12 | 9 | 4120 | - | protein coding gene | testis expressed 12 | |
Cpgi21726 | 9 | 720 | CpG island | CpG island 21726 | ||
Tssr89483 | 9 | 7 | - | TSS region | transcription start site region 89483 | |
Tssr89484 | 9 | 19 | - | TSS region | transcription start site region 89484 | |
Tssr89485 | 9 | 11 | - | TSS region | transcription start site region 89485 | |
Tssr89486 | 9 | 11 | - | TSS region | transcription start site region 89486 | |
Tssr85040 | 9 | 39 | + | TSS region | transcription start site region 85040 | |
Tssr85041 | 9 | 45 | + | TSS region | transcription start site region 85041 | |
Tssr2867 | 9 | 32 | - | TSS region | transcription start site region 2867 | |
Tssr89487 | 9 | 6 | - | TSS region | transcription start site region 89487 | |
Tssr85042 | 9 | 40 | + | TSS region | transcription start site region 85042 | |
Sdhd | 9 | 7455 | - | protein coding gene | succinate dehydrogenase complex, subunit D, integral membrane protein | |
Cpgi21727 | 9 | 1150 | CpG island | CpG island 21727 | ||
Tssr89488 | 9 | 32 | - | TSS region | transcription start site region 89488 | |
Tssr85043 | 9 | 11 | + | TSS region | transcription start site region 85043 | |
Tssr85044 | 9 | 45 | + | TSS region | transcription start site region 85044 | |
Timm8b | 9 | 1410 | + | protein coding gene | translocase of inner mitochondrial membrane 8B | |
Nkapd1 | 9 | 12224 | - | protein coding gene | NKAP domain containing 1 | |
Cpgi21728 | 9 | 1047 | CpG island | CpG island 21728 | ||
Tssr89489 | 9 | 52 | - | TSS region | transcription start site region 89489 | |
Tssr2868 | 9 | 16 | - | TSS region | transcription start site region 2868 | |
Tssr89490 | 9 | 61 | - | TSS region | transcription start site region 89490 | |
Tssr85045 | 9 | 53 | + | TSS region | transcription start site region 85045 | |
Pih1d2 | 9 | 7679 | + | protein coding gene | PIH1 domain containing 2 | |
Tssr89491 | 9 | 39 | - | TSS region | transcription start site region 89491 | |
Tssr85046 | 9 | 45 | + | TSS region | transcription start site region 85046 | |
Dlat | 9 | 25147 | - | protein coding gene | dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) | |
Cpgi21729 | 9 | 1103 | CpG island | CpG island 21729 | ||
Tssr89492 | 9 | 13 | - | TSS region | transcription start site region 89492 | |
Tssr89493 | 9 | 7 | - | TSS region | transcription start site region 89493 | |
Tssr89494 | 9 | 71 | - | TSS region | transcription start site region 89494 | |
Tssr89495 | 9 | 3 | - | TSS region | transcription start site region 89495 | |
Tssr89496 | 9 | 11 | - | TSS region | transcription start site region 89496 | |
Tssr2869 | 9 | 41 | - | TSS region | transcription start site region 2869 | |
3110005L24Rik | 9 | 1512 | + | lncRNA gene | RIKEN cDNA 3110005L24 gene | |
Dixdc1 | 9 | 76765 | - | protein coding gene | DIX domain containing 1 | |
D9Mit27 | 9 | 174 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 27 | ||
D9Mit97 | 9 | 150 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 97 | ||
Tssr89497 | 9 | 13 | - | TSS region | transcription start site region 89497 | |
Tssr89498 | 9 | 14 | - | TSS region | transcription start site region 89498 | |
Gm39337 | 9 | 19783 | + | lncRNA gene | predicted gene, 39337 | |
Cpgi21730 | 9 | 1007 | CpG island | CpG island 21730 | ||
Tssr89499 | 9 | 28 | - | TSS region | transcription start site region 89499 | |
Cpgi21731 | 9 | 1216 | CpG island | CpG island 21731 | ||
Tssr89500 | 9 | 87 | - | TSS region | transcription start site region 89500 | |
Tssr89501 | 9 | 12 | - | TSS region | transcription start site region 89501 | |
Tssr89502 | 9 | 21 | - | TSS region | transcription start site region 89502 | |
Tssr89503 | 9 | 10 | - | TSS region | transcription start site region 89503 | |
Cpgi21732 | 9 | 416 | CpG island | CpG island 21732 | ||
Tssr89504 | 9 | 14 | - | TSS region | transcription start site region 89504 | |
Tssr85047 | 9 | 3 | + | TSS region | transcription start site region 85047 | |
2310030G06Rik | 9 | 6830 | - | protein coding gene | RIKEN cDNA 2310030G06 gene | |
Tssr89505 | 9 | 19 | - | TSS region | transcription start site region 89505 | |
Tssr89506 | 9 | 96 | - | TSS region | transcription start site region 89506 | |
Hspb2 | 9 | 1276 | - | protein coding gene | heat shock protein 2 | |
Cryab | 9 | 5311 | + | protein coding gene | crystallin, alpha B | |
Tssr85048 | 9 | 28 | + | TSS region | transcription start site region 85048 | |
Cpgi21733 | 9 | 320 | CpG island | CpG island 21733 | ||
Tssr85049 | 9 | 11 | + | TSS region | transcription start site region 85049 | |
Tssr85050 | 9 | 29 | + | TSS region | transcription start site region 85050 | |
Tssr89507 | 9 | 12 | - | TSS region | transcription start site region 89507 | |
Tssr89508 | 9 | 47 | - | TSS region | transcription start site region 89508 | |
Tssr89509 | 9 | 25 | - | TSS region | transcription start site region 89509 | |
Tssr89510 | 9 | 11 | - | TSS region | transcription start site region 89510 | |
Tssr85051 | 9 | 8 | + | TSS region | transcription start site region 85051 | |
Tssr85052 | 9 | 185 | + | TSS region | transcription start site region 85052 | |
Tssr85053 | 9 | 5 | + | TSS region | transcription start site region 85053 | |
Tssr85054 | 9 | 6 | + | TSS region | transcription start site region 85054 | |
Tssr85055 | 9 | 9 | + | TSS region | transcription start site region 85055 | |
Tssr85056 | 9 | 4 | + | TSS region | transcription start site region 85056 | |
Tssr85057 | 9 | 3 | + | TSS region | transcription start site region 85057 | |
Tssr85058 | 9 | 21 | + | TSS region | transcription start site region 85058 | |
Tssr85059 | 9 | 42 | + | TSS region | transcription start site region 85059 | |
Tssr85060 | 9 | 6 | + | TSS region | transcription start site region 85060 | |
Tssr85061 | 9 | 3 | + | TSS region | transcription start site region 85061 | |
Tssr85062 | 9 | 14 | + | TSS region | transcription start site region 85062 | |
Tssr85063 | 9 | 3 | + | TSS region | transcription start site region 85063 | |
D9Mit96 | 9 | 190 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 96 | ||
repro46 | 9 | 6147917 | heritable phenotypic marker | reproductive mutant 46, JAX Reproductive Mutagenesis Program | ||
Tssr85064 | 9 | 12 | + | TSS region | transcription start site region 85064 | |
Tssr85065 | 9 | 16 | + | TSS region | transcription start site region 85065 | |
Tssr85066 | 9 | 7 | + | TSS region | transcription start site region 85066 | |
Tssr85067 | 9 | 17 | + | TSS region | transcription start site region 85067 | |
Tssr85068 | 9 | 16 | + | TSS region | transcription start site region 85068 | |
Tssr89511 | 9 | 50 | - | TSS region | transcription start site region 89511 | |
Tssr89512 | 9 | 4 | - | TSS region | transcription start site region 89512 | |
1110032A03Rik | 9 | 8574 | - | protein coding gene | RIKEN cDNA 1110032A03 gene | |
Tssr89513 | 9 | 7 | - | TSS region | transcription start site region 89513 | |
Tssr89514 | 9 | 19 | - | TSS region | transcription start site region 89514 | |
Tssr89515 | 9 | 8 | - | TSS region | transcription start site region 89515 | |
Tssr89516 | 9 | 5 | - | TSS region | transcription start site region 89516 | |
Cpgi21734 | 9 | 935 | CpG island | CpG island 21734 | ||
Tssr89517 | 9 | 77 | - | TSS region | transcription start site region 89517 | |
Tssr85069 | 9 | 43 | + | TSS region | transcription start site region 85069 | |
Fdxacb1 | 9 | 4432 | + | protein coding gene | ferredoxin-fold anticodon binding domain containing 1 | |
Gm38476 | 9 | 2998 | - | lncRNA gene | predicted gene, 38476 | |
Tssr85070 | 9 | 8 | + | TSS region | transcription start site region 85070 | |
Alg9 | 9 | 68523 | + | protein coding gene | asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) | |
Cpgi21735 | 9 | 1027 | CpG island | CpG island 21735 | ||
Tssr89518 | 9 | 24 | - | TSS region | transcription start site region 89518 | |
Tssr89519 | 9 | 31 | - | TSS region | transcription start site region 89519 | |
Tssr85071 | 9 | 48 | + | TSS region | transcription start site region 85071 | |
Tssr85072 | 9 | 22 | + | TSS region | transcription start site region 85072 | |
Tssr85073 | 9 | 5 | + | TSS region | transcription start site region 85073 | |
Tssr85074 | 9 | 12 | + | TSS region | transcription start site region 85074 | |
Tssr89520 | 9 | 5 | - | TSS region | transcription start site region 89520 | |
Tssr85075 | 9 | 27 | + | TSS region | transcription start site region 85075 | |
C130081A10Rik | 9 | 1453 | unclassified gene | RIKEN cDNA C130081A10 gene |