Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:49556422-49956425

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncam1 9 49502136 to 49798925 296789 - protein coding gene neural cell adhesion molecule 1
Gm11149 9 49518288 to 49568025 49737 + antisense lncRNA gene predicted gene 11149
Tssr85017 9 49559225 to 49559228 3 + TSS region transcription start site region 85017
Tssr89455 9 49568469 to 49568505 36 - TSS region transcription start site region 89455
Tssr89456 9 49568518 to 49568533 15 - TSS region transcription start site region 89456
Tssr89457 9 49570824 to 49570850 26 - TSS region transcription start site region 89457
D9Mit171 9 49599872 to 49600121 249 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 171
Hts 9 49599872 to 49600121 249 QTL hypothermia sensitivity
Tssr89458 9 49630289 to 49630292 3 - TSS region transcription start site region 89458
Tssr89459 9 49673942 to 49673944 2 - TSS region transcription start site region 89459
Tssr89460 9 49714158 to 49714169 11 - TSS region transcription start site region 89460
Tssr89461 9 49715960 to 49715987 27 - TSS region transcription start site region 89461
Tssr89462 9 49716058 to 49716079 21 - TSS region transcription start site region 89462
Tssr89463 9 49718740 to 49718745 5 - TSS region transcription start site region 89463
Tssr89464 9 49756422 to 49756425 3 - TSS region transcription start site region 89464
Tssr89465 9 49765917 to 49765921 4 - TSS region transcription start site region 89465
D9Mit46 9 49782040 to 49782153 113 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 46
Tssr89466 9 49794457 to 49794461 4 - TSS region transcription start site region 89466
Cpgi21723 9 49796656 to 49799162 2506 CpG island CpG island 21723
Tssr89467 9 49798821 to 49798855 34 - TSS region transcription start site region 89467
Tssr89468 9 49798905 to 49798931 26 - TSS region transcription start site region 89468
Tssr2865 9 49798947 to 49798958 11 - TSS region transcription start site region 2865
Gm25633 9 49825869 to 49825975 106 - snRNA gene predicted gene, 25633
D9Mit131.1 9 49912510 to 49912656 146 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 131.1
D9Mit131 9 49912652 to 49912799 147 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 131
D9Mit131.2 9 49912746 to 49912855 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 131.2
Tssr85018 9 49954868 to 49954891 23 + TSS region transcription start site region 85018
Gm47543 9 49954878 to 49956554 1676 + lincRNA gene predicted gene, 47543
Tssr85019 9 49954893 to 49954900 7 + TSS region transcription start site region 85019
Tssr85020 9 49954902 to 49954911 9 + TSS region transcription start site region 85020