Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:49028127-49268141

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp28 9 48985375 to 49042517 57142 + protein coding gene ubiquitin specific peptidase 28
Tssr85003 9 49028128 to 49028140 12 + TSS region transcription start site region 85003
Tssr85004 9 49030876 to 49030883 7 + TSS region transcription start site region 85004
Tssr85005 9 49037281 to 49037283 2 + TSS region transcription start site region 85005
Cldn25-ps 9 49047676 to 49048267 591 - pseudogene claudin 25, pseudogene
1700042D02Rik 9 49051335 to 49055465 4130 - lincRNA gene RIKEN cDNA 1700042D02 gene
Cpgi21720 9 49055441 to 49056112 671 CpG island CpG island 21720
Tssr89423 9 49055486 to 49055497 11 - TSS region transcription start site region 89423
Tssr85006 9 49055574 to 49055629 55 + TSS region transcription start site region 85006
Zw10 9 49055613 to 49078775 23162 + protein coding gene zw10 kinetochore protein
Tssr85007 9 49055635 to 49055682 47 + TSS region transcription start site region 85007
Tssr89424 9 49079358 to 49079378 20 - TSS region transcription start site region 89424
Tmprss5 9 49081260 to 49117587 36327 + protein coding gene transmembrane protease, serine 5 (spinesin)
D9Mit99 9 49095649 to 49095834 185 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 99
Tssr85008 9 49102720 to 49102752 32 + TSS region transcription start site region 85008
Tssr85009 9 49108662 to 49108665 3 + TSS region transcription start site region 85009
Tssr89425 9 49148127 to 49148141 14 - TSS region transcription start site region 89425
Tssr2864 9 49222172 to 49222176 4 + TSS region transcription start site region 2864
D9Mit315 9 49227794 to 49227912 118 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-315
Tssr85010 9 49250485 to 49250532 47 + TSS region transcription start site region 85010
Gm4894 9 49250531 to 49280594 30063 + protein coding gene predicted gene 4894