Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Rapop7 | 9 | 12684264 | QTL | radiation-induced apoptosis 6 | ||
Lmr2 | 9 | 13167730 | QTL | leishmaniasis resistance 2 | ||
Tdmq1 | 9 | 11389072 | QTL | type 2 diabetes modifying QTL 1 | ||
Htr3b | 9 | 29982 | - | protein coding gene | 5-hydroxytryptamine (serotonin) receptor 3B | |
Cpgi21719 | 9 | 1213 | CpG island | CpG island 21719 | ||
Tssr84998 | 9 | 93 | + | TSS region | transcription start site region 84998 | |
Usp28 | 9 | 57142 | + | protein coding gene | ubiquitin specific peptidase 28 | |
Tssr84999 | 9 | 11 | + | TSS region | transcription start site region 84999 | |
Tssr85000 | 9 | 8 | + | TSS region | transcription start site region 85000 | |
Tssr85001 | 9 | 18 | + | TSS region | transcription start site region 85001 | |
Tssr85002 | 9 | 3 | + | TSS region | transcription start site region 85002 | |
Tssr85003 | 9 | 12 | + | TSS region | transcription start site region 85003 | |
Tssr85004 | 9 | 7 | + | TSS region | transcription start site region 85004 | |
Tssr85005 | 9 | 2 | + | TSS region | transcription start site region 85005 | |
Cldn25-ps | 9 | 591 | - | pseudogene | claudin 25, pseudogene | |
1700042D02Rik | 9 | 4130 | - | lincRNA gene | RIKEN cDNA 1700042D02 gene | |
Cpgi21720 | 9 | 671 | CpG island | CpG island 21720 | ||
Tssr89423 | 9 | 11 | - | TSS region | transcription start site region 89423 | |
Tssr85006 | 9 | 55 | + | TSS region | transcription start site region 85006 | |
Zw10 | 9 | 23162 | + | protein coding gene | zw10 kinetochore protein | |
Tssr85007 | 9 | 47 | + | TSS region | transcription start site region 85007 | |
Tssr89424 | 9 | 20 | - | TSS region | transcription start site region 89424 | |
Tmprss5 | 9 | 36327 | + | protein coding gene | transmembrane protease, serine 5 (spinesin) | |
D9Mit99 | 9 | 185 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 99 | ||
Tssr85008 | 9 | 32 | + | TSS region | transcription start site region 85008 | |
Tssr85009 | 9 | 3 | + | TSS region | transcription start site region 85009 | |
Tssr89425 | 9 | 14 | - | TSS region | transcription start site region 89425 | |
Tssr2864 | 9 | 4 | + | TSS region | transcription start site region 2864 | |
D9Mit315 | 9 | 118 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology-315 | ||
Tssr85010 | 9 | 47 | + | TSS region | transcription start site region 85010 | |
Gm4894 | 9 | 30063 | + | protein coding gene | predicted gene 4894 | |
Cpgi21721 | 9 | 1102 | CpG island | CpG island 21721 | ||
Tssr85011 | 9 | 10 | + | TSS region | transcription start site region 85011 | |
Tssr85012 | 9 | 3 | + | TSS region | transcription start site region 85012 | |
Tssr85013 | 9 | 21 | + | TSS region | transcription start site region 85013 | |
Drd2 | 9 | 67550 | + | protein coding gene | dopamine receptor D2 | |
Gm46112 | 9 | 2962 | - | lncRNA gene | predicted gene, 46112 | |
Gm46111 | 9 | 3425 | - | lncRNA gene | predicted gene, 46111 | |
Tssr89426 | 9 | 19 | - | TSS region | transcription start site region 89426 | |
Ankk1 | 9 | 11827 | - | protein coding gene | ankyrin repeat and kinase domain containing 1 | |
Ttc12 | 9 | 49262 | - | protein coding gene | tetratricopeptide repeat domain 12 | |
Tssr89427 | 9 | 14 | - | TSS region | transcription start site region 89427 | |
Cpgi21722 | 9 | 546 | CpG island | CpG island 21722 | ||
Tssr89428 | 9 | 23 | - | TSS region | transcription start site region 89428 | |
Tssr89429 | 9 | 11 | - | TSS region | transcription start site region 89429 | |
Tssr89430 | 9 | 21 | - | TSS region | transcription start site region 89430 | |
4921518B13Rik | 9 | 1703 | unclassified gene | RIKEN cDNA 4921518B13 gene | ||
Tssr89431 | 9 | 32 | - | TSS region | transcription start site region 89431 | |
Ncam1 | 9 | 296789 | - | protein coding gene | neural cell adhesion molecule 1 | |
Tssr89432 | 9 | 12 | - | TSS region | transcription start site region 89432 | |
Tssr89433 | 9 | 15 | - | TSS region | transcription start site region 89433 | |
Tssr89434 | 9 | 22 | - | TSS region | transcription start site region 89434 | |
Tssr89435 | 9 | 14 | - | TSS region | transcription start site region 89435 | |
Tssr89436 | 9 | 12 | - | TSS region | transcription start site region 89436 | |
Tssr89437 | 9 | 17 | - | TSS region | transcription start site region 89437 | |
D9Mit98 | 9 | 347 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 98 | ||
Tssr89438 | 9 | 21 | - | TSS region | transcription start site region 89438 | |
Tssr89439 | 9 | 28 | - | TSS region | transcription start site region 89439 | |
Tssr85014 | 9 | 11 | + | TSS region | transcription start site region 85014 | |
Tssr89440 | 9 | 41 | - | TSS region | transcription start site region 89440 | |
Tssr89441 | 9 | 25 | - | TSS region | transcription start site region 89441 | |
Tssr89442 | 9 | 25 | - | TSS region | transcription start site region 89442 | |
Tssr89443 | 9 | 19 | - | TSS region | transcription start site region 89443 | |
Tssr89444 | 9 | 12 | - | TSS region | transcription start site region 89444 | |
Tssr89445 | 9 | 30 | - | TSS region | transcription start site region 89445 | |
Tssr89446 | 9 | 35 | - | TSS region | transcription start site region 89446 | |
Tssr89447 | 9 | 16 | - | TSS region | transcription start site region 89447 | |
D9Mit22 | 9 | 213 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 22 | ||
Eae9 | 9 | 13823572 | QTL | experimental allergic encephalomyelitis susceptibility 9 | ||
El4 | 9 | 17735168 | QTL | epilepsy 4 | ||
D9Nds6 | 9 | 191 | DNA segment | DNA segment, Chr 9, Nuffield Department of Surgery 6 | ||
Tssr89448 | 9 | 31 | - | TSS region | transcription start site region 89448 | |
Tssr89449 | 9 | 59 | - | TSS region | transcription start site region 89449 | |
repro28 | 9 | 20316777 | heritable phenotypic marker | reproductive mutant 28, JAX Reproductive Mutagenesis Program | ||
D9Mit299 | 9 | 84 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 299 | ||
Tssr89450 | 9 | 3 | - | TSS region | transcription start site region 89450 | |
Tssr89451 | 9 | 19 | - | TSS region | transcription start site region 89451 | |
Gm11149 | 9 | 49737 | + | antisense lncRNA gene | predicted gene 11149 | |
Tssr85015 | 9 | 20 | + | TSS region | transcription start site region 85015 | |
Tssr85016 | 9 | 3 | + | TSS region | transcription start site region 85016 | |
Actd4 | 9 | 294 | QTL | activity-distance traveled 4 | ||
D9Mit94 | 9 | 294 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 94 | ||
Tssr89452 | 9 | 11 | - | TSS region | transcription start site region 89452 | |
Cq5 | 9 | 125 | QTL | cholesterol QTL 5 | ||
D9Mit229 | 9 | 125 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 229 | ||
Tssr89453 | 9 | 17 | - | TSS region | transcription start site region 89453 | |
Tssr89454 | 9 | 21 | - | TSS region | transcription start site region 89454 | |
Tssr85017 | 9 | 3 | + | TSS region | transcription start site region 85017 | |
Tssr89455 | 9 | 36 | - | TSS region | transcription start site region 89455 | |
Tssr89456 | 9 | 15 | - | TSS region | transcription start site region 89456 | |
Tssr89457 | 9 | 26 | - | TSS region | transcription start site region 89457 | |
Hts | 9 | 249 | QTL | hypothermia sensitivity | ||
D9Mit171 | 9 | 249 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 171 | ||
Tssr89458 | 9 | 3 | - | TSS region | transcription start site region 89458 | |
Tssr89459 | 9 | 2 | - | TSS region | transcription start site region 89459 | |
Tssr89460 | 9 | 11 | - | TSS region | transcription start site region 89460 | |
Tssr89461 | 9 | 27 | - | TSS region | transcription start site region 89461 | |
Tssr89462 | 9 | 21 | - | TSS region | transcription start site region 89462 | |
Tssr89463 | 9 | 5 | - | TSS region | transcription start site region 89463 | |
Tssr89464 | 9 | 3 | - | TSS region | transcription start site region 89464 | |
Tssr89465 | 9 | 4 | - | TSS region | transcription start site region 89465 | |
D9Mit46 | 9 | 113 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 46 | ||
Tssr89466 | 9 | 4 | - | TSS region | transcription start site region 89466 | |
Cpgi21723 | 9 | 2506 | CpG island | CpG island 21723 | ||
Tssr89467 | 9 | 34 | - | TSS region | transcription start site region 89467 | |
Tssr89468 | 9 | 26 | - | TSS region | transcription start site region 89468 | |
Tssr2865 | 9 | 11 | - | TSS region | transcription start site region 2865 | |
Gm25633 | 9 | 106 | - | snRNA gene | predicted gene, 25633 | |
D9Mit131.1 | 9 | 146 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131.1 | ||
D9Mit131 | 9 | 147 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131 | ||
D9Mit131.2 | 9 | 109 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 131.2 | ||
Tssr85018 | 9 | 23 | + | TSS region | transcription start site region 85018 | |
Gm47543 | 9 | 1676 | + | lincRNA gene | predicted gene, 47543 | |
Tssr85019 | 9 | 7 | + | TSS region | transcription start site region 85019 | |
Tssr85020 | 9 | 9 | + | TSS region | transcription start site region 85020 | |
D9Mit162.1 | 9 | 200 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 162.1 | ||
D9Mit162 | 9 | 134 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 162 | ||
Ptnu3 | 9 | 134 | QTL | proteinuria 3 | ||
Tssr89469 | 9 | 14 | - | TSS region | transcription start site region 89469 | |
Gm8907 | 9 | 1002 | - | pseudogene | predicted gene 8907 | |
Si5lq3 | 9 | 115 | QTL | serum IGFBP-5 level QTL 3 | ||
D9Mit71 | 9 | 115 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 71 | ||
repro36 | 9 | 10294689 | heritable phenotypic marker | reproductive mutant 36, JAX Reproductive Mutagenesis Program | ||
Tglq7 | 9 | 1400000 | QTL | triglyceride QTL 7 | ||
Gm4042 | 9 | 626 | + | pseudogene | predicted gene 4042 | |
2310003N18Rik | 9 | 659 | - | lincRNA gene | RIKEN cDNA 2310003N18 gene | |
Tssr89470 | 9 | 4 | - | TSS region | transcription start site region 89470 | |
Gm40519 | 9 | 7785 | - | lncRNA gene | predicted gene, 40519 | |
Tssr85021 | 9 | 1 | + | TSS region | transcription start site region 85021 | |
D9Mit288 | 9 | 96 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 288 | ||
Gm39336 | 9 | 1033 | - | lincRNA gene | predicted gene, 39336 | |
Rpl10-ps3 | 9 | 758 | - | pseudogene | ribosomal protein L10, pseudogene 3 | |
Tssr89471 | 9 | 2 | - | TSS region | transcription start site region 89471 | |
Gm38579 | 9 | 1549 | - | lncRNA gene | predicted gene, 38579 | |
D9Mit172 | 9 | 141 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 172 | ||
Tssr89472 | 9 | 12 | - | TSS region | transcription start site region 89472 | |
Tssr89473 | 9 | 17 | - | TSS region | transcription start site region 89473 | |
Tssr89474 | 9 | 22 | - | TSS region | transcription start site region 89474 | |
Gm32462 | 9 | 13936 | - | lncRNA gene | predicted gene, 32462 | |
Tssr89475 | 9 | 18 | - | TSS region | transcription start site region 89475 | |
Tssr85022 | 9 | 2 | + | TSS region | transcription start site region 85022 | |
Tssr89476 | 9 | 9 | - | TSS region | transcription start site region 89476 | |
Tssr89477 | 9 | 10 | - | TSS region | transcription start site region 89477 | |
Gm9557 | 9 | 1481 | + | pseudogene | predicted gene 9557 | |
Plet1os | 9 | 16006 | - | antisense lncRNA gene | placenta expressed transcript 1, opposite strand | |
Tssr2866 | 9 | 9 | + | TSS region | transcription start site region 2866 | |
Tssr85023 | 9 | 7 | + | TSS region | transcription start site region 85023 | |
Tssr85024 | 9 | 39 | + | TSS region | transcription start site region 85024 | |
Tssr85025 | 9 | 17 | + | TSS region | transcription start site region 85025 | |
Plet1 | 9 | 10957 | + | protein coding gene | placenta expressed transcript 1 | |
Tssr85026 | 9 | 25 | + | TSS region | transcription start site region 85026 | |
Cpgi21724 | 9 | 246 | CpG island | CpG island 21724 | ||
Tssr85027 | 9 | 20 | + | TSS region | transcription start site region 85027 | |
Tssr85028 | 9 | 12 | + | TSS region | transcription start site region 85028 | |
Tssr85029 | 9 | 13 | + | TSS region | transcription start site region 85029 | |
Tssr85030 | 9 | 12 | + | TSS region | transcription start site region 85030 | |
Tssr85031 | 9 | 26 | + | TSS region | transcription start site region 85031 | |
Tssr85032 | 9 | 11 | + | TSS region | transcription start site region 85032 | |
Tssr85033 | 9 | 41 | + | TSS region | transcription start site region 85033 | |
Tssr85034 | 9 | 18 | + | TSS region | transcription start site region 85034 | |
Tssr85035 | 9 | 14 | + | TSS region | transcription start site region 85035 | |
Tssr89478 | 9 | 42 | - | TSS region | transcription start site region 89478 | |
Tssr85036 | 9 | 3 | + | TSS region | transcription start site region 85036 | |
Tssr89479 | 9 | 11 | - | TSS region | transcription start site region 89479 | |
Pts | 9 | 7024 | - | protein coding gene | 6-pyruvoyl-tetrahydropterin synthase | |
Cpgi21725 | 9 | 663 | CpG island | CpG island 21725 | ||
Tssr89480 | 9 | 56 | - | TSS region | transcription start site region 89480 | |
Tssr85037 | 9 | 30 | + | TSS region | transcription start site region 85037 | |
Gm47077 | 9 | 4985 | + | antisense lncRNA gene | predicted gene, 47077 | |
Bco2 | 9 | 22094 | - | protein coding gene | beta-carotene oxygenase 2 | |
D9Mit70 | 9 | 163 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 70 | ||
D9Mit70.1 | 9 | 129 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 70.1 | ||
Il18 | 9 | 27013 | + | protein coding gene | interleukin 18 | |
Tssr85038 | 9 | 15 | + | TSS region | transcription start site region 85038 | |
Tssr85039 | 9 | 85 | + | TSS region | transcription start site region 85039 | |
Tssr89481 | 9 | 24 | - | TSS region | transcription start site region 89481 | |
Tssr89482 | 9 | 13 | - | TSS region | transcription start site region 89482 | |
Tex12 | 9 | 4120 | - | protein coding gene | testis expressed 12 | |
Cpgi21726 | 9 | 720 | CpG island | CpG island 21726 | ||
Tssr89483 | 9 | 7 | - | TSS region | transcription start site region 89483 | |
Tssr89484 | 9 | 19 | - | TSS region | transcription start site region 89484 | |
Tssr89485 | 9 | 11 | - | TSS region | transcription start site region 89485 | |
Tssr89486 | 9 | 11 | - | TSS region | transcription start site region 89486 | |
Tssr85040 | 9 | 39 | + | TSS region | transcription start site region 85040 | |
Tssr85041 | 9 | 45 | + | TSS region | transcription start site region 85041 | |
Tssr2867 | 9 | 32 | - | TSS region | transcription start site region 2867 | |
Tssr89487 | 9 | 6 | - | TSS region | transcription start site region 89487 | |
Tssr85042 | 9 | 40 | + | TSS region | transcription start site region 85042 | |
Sdhd | 9 | 7455 | - | protein coding gene | succinate dehydrogenase complex, subunit D, integral membrane protein | |
Cpgi21727 | 9 | 1150 | CpG island | CpG island 21727 | ||
Tssr89488 | 9 | 32 | - | TSS region | transcription start site region 89488 | |
Tssr85043 | 9 | 11 | + | TSS region | transcription start site region 85043 | |
Tssr85044 | 9 | 45 | + | TSS region | transcription start site region 85044 | |
Timm8b | 9 | 1410 | + | protein coding gene | translocase of inner mitochondrial membrane 8B | |
Nkapd1 | 9 | 12224 | - | protein coding gene | NKAP domain containing 1 | |
Cpgi21728 | 9 | 1047 | CpG island | CpG island 21728 | ||
Tssr89489 | 9 | 52 | - | TSS region | transcription start site region 89489 | |
Tssr2868 | 9 | 16 | - | TSS region | transcription start site region 2868 | |
Tssr89490 | 9 | 61 | - | TSS region | transcription start site region 89490 | |
Tssr85045 | 9 | 53 | + | TSS region | transcription start site region 85045 |