Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:48955613-49178775

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Htr3b	9	48935008 to 48964990	29982	-	protein coding gene	5-hydroxytryptamine (serotonin) receptor 3B
Cpgi21719	9	48984777 to 48985990	1213		CpG island	CpG island 21719
Tssr84998	9	48985358 to 48985451	93	+	TSS region	transcription start site region 84998
Usp28	9	48985375 to 49042517	57142	+	protein coding gene	ubiquitin specific peptidase 28
Tssr84999	9	48985467 to 48985478	11	+	TSS region	transcription start site region 84999
Tssr85000	9	48987428 to 48987436	8	+	TSS region	transcription start site region 85000
Tssr85001	9	48991987 to 48992005	18	+	TSS region	transcription start site region 85001
Tssr85002	9	49002585 to 49002588	3	+	TSS region	transcription start site region 85002
Tssr85003	9	49028128 to 49028140	12	+	TSS region	transcription start site region 85003
Tssr85004	9	49030876 to 49030883	7	+	TSS region	transcription start site region 85004
Tssr85005	9	49037281 to 49037283	2	+	TSS region	transcription start site region 85005
Cldn25-ps	9	49047676 to 49048267	591	-	pseudogene	claudin 25, pseudogene
1700042D02Rik	9	49051335 to 49055465	4130	-	lincRNA gene	RIKEN cDNA 1700042D02 gene
Cpgi21720	9	49055441 to 49056112	671		CpG island	CpG island 21720
Tssr89423	9	49055486 to 49055497	11	-	TSS region	transcription start site region 89423
Tssr85006	9	49055574 to 49055629	55	+	TSS region	transcription start site region 85006
Zw10	9	49055613 to 49078775	23162	+	protein coding gene	zw10 kinetochore protein
Tssr85007	9	49055635 to 49055682	47	+	TSS region	transcription start site region 85007
Tssr89424	9	49079358 to 49079378	20	-	TSS region	transcription start site region 89424
Tmprss5	9	49081260 to 49117587	36327	+	protein coding gene	transmembrane protease, serine 5 (spinesin)
D9Mit99	9	49095649 to 49095834	185		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 99
Tssr85008	9	49102720 to 49102752	32	+	TSS region	transcription start site region 85008
Tssr85009	9	49108662 to 49108665	3	+	TSS region	transcription start site region 85009
Tssr89425	9	49148127 to 49148141	14	-	TSS region	transcription start site region 89425