Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:48885008-49014990

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi21718	9	48896317 to 48896500	183		CpG island	CpG island 21718
Gm32335	9	48896451 to 48905982	9531	+	antisense lncRNA gene	predicted gene, 32335
Htr3a	9	48899213 to 48911099	11886	-	protein coding gene	5-hydroxytryptamine (serotonin) receptor 3A
Tssr89420	9	48910920 to 48910946	26	-	TSS region	transcription start site region 89420
Tssr89421	9	48911067 to 48911078	11	-	TSS region	transcription start site region 89421
Tssr89422	9	48911120 to 48911140	20	-	TSS region	transcription start site region 89422
Htr3b	9	48935008 to 48964990	29982	-	protein coding gene	5-hydroxytryptamine (serotonin) receptor 3B
Cpgi21719	9	48984777 to 48985990	1213		CpG island	CpG island 21719
Tssr84998	9	48985358 to 48985451	93	+	TSS region	transcription start site region 84998
Usp28	9	48985375 to 49042517	57142	+	protein coding gene	ubiquitin specific peptidase 28
Tssr84999	9	48985467 to 48985478	11	+	TSS region	transcription start site region 84999
Tssr85000	9	48987428 to 48987436	8	+	TSS region	transcription start site region 85000
Tssr85001	9	48991987 to 48992005	18	+	TSS region	transcription start site region 85001
Tssr85002	9	49002585 to 49002588	3	+	TSS region	transcription start site region 85002