Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:48112023-48450025

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36 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc39 9 40734078 to 48440176 7706098 QTL susceptibility to lung cancer 39
Gm40518 9 48132748 to 48158748 26000 - lncRNA gene predicted gene, 40518
Tssr84972 9 48162008 to 48162045 37 + TSS region transcription start site region 84972
Nxpe4 9 48162023 to 48400025 238002 + protein coding gene neurexophilin and PC-esterase domain family, member 4
Gm51672 9 48257018 to 48284009 26991 - lincRNA gene predicted gene, 51672
Cpgi21714 9 48266859 to 48267467 608 CpG island CpG island 21714
Tssr84973 9 48314424 to 48314443 19 + TSS region transcription start site region 84973
Tssr84974 9 48314449 to 48314505 56 + TSS region transcription start site region 84974
Nxpe2 9 48318003 to 48353449 35446 - protein coding gene neurexophilin and PC-esterase domain family, member 2
Tssr89370 9 48319371 to 48319376 5 - TSS region transcription start site region 89370
Tssr89371 9 48339722 to 48339754 32 - TSS region transcription start site region 89371
Tssr89372 9 48340623 to 48340634 11 - TSS region transcription start site region 89372
Tssr89373 9 48340652 to 48340668 16 - TSS region transcription start site region 89373
Tssr89374 9 48340682 to 48340685 3 - TSS region transcription start site region 89374
Tssr89375 9 48340694 to 48340697 3 - TSS region transcription start site region 89375
Tssr89376 9 48340774 to 48340791 17 - TSS region transcription start site region 89376
Tssr89377 9 48340792 to 48340809 17 - TSS region transcription start site region 89377
Tssr89378 9 48340814 to 48340842 28 - TSS region transcription start site region 89378
Tssr89379 9 48340845 to 48340860 15 - TSS region transcription start site region 89379
Tssr89380 9 48340876 to 48340893 17 - TSS region transcription start site region 89380
Tssr84975 9 48362034 to 48362056 22 + TSS region transcription start site region 84975
Tssr89381 9 48388376 to 48388381 5 - TSS region transcription start site region 89381
Tssr84976 9 48390048 to 48390059 11 + TSS region transcription start site region 84976
D9Mit298 9 48393836 to 48393956 120 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 298
Tssr84977 9 48403793 to 48403833 40 + TSS region transcription start site region 84977
Tssr84978 9 48403924 to 48403938 14 + TSS region transcription start site region 84978
Tssr84979 9 48403954 to 48403963 9 + TSS region transcription start site region 84979
Tssr84980 9 48407721 to 48407760 39 + TSS region transcription start site region 84980
Gm32131 9 48418132 to 48420816 2684 - lncRNA gene predicted gene, 32131
Tssr84981 9 48418309 to 48418328 19 + TSS region transcription start site region 84981
Tssr84982 9 48418559 to 48418585 26 + TSS region transcription start site region 84982
Nxpe1-ps 9 48420046 to 48431940 11894 + pseudogene neurexophilin and PC-esterase domain family, member 1, pseudogene
Tssr89382 9 48420567 to 48420578 11 - TSS region transcription start site region 89382
Tssr89383 9 48420599 to 48420638 39 - TSS region transcription start site region 89383
D9Mit154 9 48440047 to 48440176 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 154
D9Mit256 9 48443938 to 48444055 117 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 256