Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:47737880-48158161

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cadm1 9 47530173 to 47857637 327464 + protein coding gene cell adhesion molecule 1
Tssr84944 9 47738692 to 47738700 8 + TSS region transcription start site region 84944
Tssr84945 9 47739704 to 47739708 4 + TSS region transcription start site region 84945
Tssr84946 9 47740155 to 47740160 5 + TSS region transcription start site region 84946
Tssr84947 9 47745402 to 47745408 6 + TSS region transcription start site region 84947
Tssr84948 9 47745910 to 47745930 20 + TSS region transcription start site region 84948
Gm47198 9 47771141 to 47773375 2234 + unclassified gene predicted gene, 47198
Gm47197 9 47773791 to 47776737 2946 - unclassified gene predicted gene, 47197
D9Ertd341e 9 47783111 to 47783335 224 DNA segment DNA segment, Chr 9, ERATO Doi 341, expressed
Tssr84949 9 47789779 to 47789814 35 + TSS region transcription start site region 84949
Tssr84950 9 47796002 to 47796006 4 + TSS region transcription start site region 84950
Gm10677 9 47799160 to 47818208 19048 - lncRNA gene predicted gene 10677
Tssr84951 9 47799469 to 47799500 31 + TSS region transcription start site region 84951
Tssr84952 9 47810081 to 47810093 12 + TSS region transcription start site region 84952
Tssr84953 9 47810095 to 47810109 14 + TSS region transcription start site region 84953
Tssr84954 9 47813789 to 47813813 24 + TSS region transcription start site region 84954
Tssr84955 9 47813831 to 47813843 12 + TSS region transcription start site region 84955
Tssr84956 9 47813903 to 47813923 20 + TSS region transcription start site region 84956
Tssr84957 9 47818720 to 47818751 31 + TSS region transcription start site region 84957
D9Mit95 9 47828617 to 47828723 106 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 95
Vtbt7 9 47828617 to 47828723 106 QTL vertebral trabecular bone trait 7
Tssr84958 9 47832938 to 47832944 6 + TSS region transcription start site region 84958
Tssr84959 9 47848214 to 47848253 39 + TSS region transcription start site region 84959
Tssr84960 9 47850288 to 47850317 29 + TSS region transcription start site region 84960
Tssr84961 9 47850533 to 47850554 21 + TSS region transcription start site region 84961
Tssr84962 9 47850638 to 47850685 47 + TSS region transcription start site region 84962
Tssr84963 9 47852403 to 47852420 17 + TSS region transcription start site region 84963
Tssr84964 9 47852449 to 47852495 46 + TSS region transcription start site region 84964
Tssr84965 9 47852555 to 47852572 17 + TSS region transcription start site region 84965
Tssr84966 9 47852595 to 47852612 17 + TSS region transcription start site region 84966
Tssr84967 9 47852621 to 47852637 16 + TSS region transcription start site region 84967
Tssr84968 9 47852843 to 47852892 49 + TSS region transcription start site region 84968
Tssr84969 9 47853101 to 47853123 22 + TSS region transcription start site region 84969
Tssr84970 9 47893258 to 47893307 49 + TSS region transcription start site region 84970
Tssr84971 9 47893310 to 47893320 10 + TSS region transcription start site region 84971
Tssr2861 9 47894177 to 47894208 31 - TSS region transcription start site region 2861
Gm32016 9 47939416 to 47950344 10928 + lncRNA gene predicted gene, 32016
Gm47213 9 47947880 to 47948161 281 - pseudogene predicted gene, 47213
Gm47215 9 47964476 to 47967312 2836 + unclassified gene predicted gene, 47215
Gm47236 9 48000353 to 48000798 445 - pseudogene predicted gene, 47236
A730065G17Rik 9 48049516 to 48071634 22118 + lincRNA gene RIKEN cDNA A730065G17 gene
Gm40518 9 48132748 to 48158748 26000 - lincRNA gene predicted gene, 40518