Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:4652959-5304174

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gria4 9 4417896 to 4796234 378338 - protein coding gene glutamate receptor, ionotropic, AMPA4 (alpha 4)
Tssr88040 9 4765243 to 4765247 4 - TSS region transcription start site region 88040
Cpgi21336 9 4795545 to 4796457 912 CpG island CpG island 21336
Tssr88041 9 4795561 to 4795644 83 - TSS region transcription start site region 88041
Tssr88042 9 4795914 to 4795928 14 - TSS region transcription start site region 88042
Tssr88043 9 4795951 to 4795964 13 - TSS region transcription start site region 88043
Tssr88044 9 4795969 to 4795987 18 - TSS region transcription start site region 88044
Tssr88045 9 4796022 to 4796033 11 - TSS region transcription start site region 88045
Tssr88046 9 4796034 to 4796066 32 - TSS region transcription start site region 88046
Tssr88047 9 4796070 to 4796081 11 - TSS region transcription start site region 88047
Tssr88048 9 4796141 to 4796159 18 - TSS region transcription start site region 88048
Tssr88049 9 4796160 to 4796195 35 - TSS region transcription start site region 88049
Tssr88050 9 4796196 to 4796216 20 - TSS region transcription start site region 88050
Tssr88051 9 4796218 to 4796267 49 - TSS region transcription start site region 88051
Gm46100 9 4796337 to 4800157 3820 + lncRNA gene predicted gene, 46100
Cpgi21337 9 4977605 to 4977809 204 CpG island CpG island 21337
Gm7390 9 4977959 to 4979174 1215 + pseudogene predicted gene 7390
Gm24896 9 5111399 to 5111533 134 + snoRNA gene predicted gene, 24896
Gm40508 9 5127223 to 5155287 28064 + lncRNA gene predicted gene, 40508
Gm31429 9 5157038 to 5166906 9868 + lncRNA gene predicted gene, 31429
Gm31492 9 5159386 to 5171522 12136 - lncRNA gene predicted gene, 31492
Tssr83630 9 5297999 to 5298001 2 + TSS region transcription start site region 83630
Casp1 9 5298517 to 5307265 8748 + protein coding gene caspase 1
Tssr83631 9 5298669 to 5298694 25 + TSS region transcription start site region 83631
Tssr83632 9 5298767 to 5298781 14 + TSS region transcription start site region 83632
Tssr83633 9 5299174 to 5299216 42 + TSS region transcription start site region 83633
Tssr83634 9 5299245 to 5299262 17 + TSS region transcription start site region 83634
Tssr83635 9 5299267 to 5299283 16 + TSS region transcription start site region 83635
Tssr83636 9 5299290 to 5299307 17 + TSS region transcription start site region 83636
Tssr83637 9 5299402 to 5299415 13 + TSS region transcription start site region 83637
Tssr83638 9 5299433 to 5299445 12 + TSS region transcription start site region 83638
Tssr83639 9 5299476 to 5299501 25 + TSS region transcription start site region 83639
Tssr83640 9 5301144 to 5301172 28 + TSS region transcription start site region 83640
Tssr83641 9 5303073 to 5303100 27 + TSS region transcription start site region 83641
Tssr83642 9 5303550 to 5303563 13 + TSS region transcription start site region 83642
Tssr83643 9 5303631 to 5303653 22 + TSS region transcription start site region 83643