MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:45843425-45926911

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Bace1	9	45838545 to 45862484	23939	+	protein coding gene	beta-site APP cleaving enzyme 1
Tssr84812	9	45852704 to 45852718	14	+	TSS region	transcription start site region 84812
Tssr84813	9	45852740 to 45852756	16	+	TSS region	transcription start site region 84813
Gm16536	9	45856769 to 45858357	1588	-	antisense lncRNA gene	predicted gene 16536
Gm49338	9	45858604 to 45860682	2078	-	unclassified gene	predicted gene, 49338
Tssr84814	9	45858624 to 45858630	6	+	TSS region	transcription start site region 84814
Rnf214	9	45863425 to 45906911	43486	-	protein coding gene	ring finger protein 214
Tssr2848	9	45868890 to 45868895	5	+	TSS region	transcription start site region 2848
Gm24646	9	45879550 to 45879648	98	-	snRNA gene	predicted gene, 24646
Tssr89272	9	45900259 to 45900263	4	-	TSS region	transcription start site region 89272
Cpgi21697	9	45905701 to 45907374	1673		CpG island	CpG island 21697
Tssr89273	9	45906369 to 45906437	68	-	TSS region	transcription start site region 89273
Pcsk7	9	45906497 to 45929726	23229	+	protein coding gene	proprotein convertase subtilisin/kexin type 7
Tssr84815	9	45906513 to 45906552	39	+	TSS region	transcription start site region 84815
Tssr89274	9	45906837 to 45906894	57	-	TSS region	transcription start site region 89274
Tssr89275	9	45906898 to 45906921	23	-	TSS region	transcription start site region 89275
Tssr84816	9	45906925 to 45907013	88	+	TSS region	transcription start site region 84816
Tssr89276	9	45907585 to 45907589	4	-	TSS region	transcription start site region 89276