Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45833425-45936911

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7286 9 45835929 to 45836935 1006 - pseudogene predicted gene 7286
Bace1 9 45838545 to 45862484 23939 + protein coding gene beta-site APP cleaving enzyme 1
Tssr84808 9 45838572 to 45838592 20 + TSS region transcription start site region 84808
Cpgi21696 9 45838573 to 45839276 703 CpG island CpG island 21696
Tssr84809 9 45839881 to 45839896 15 + TSS region transcription start site region 84809
Tssr84810 9 45839942 to 45839954 12 + TSS region transcription start site region 84810
Tssr84811 9 45841112 to 45841121 9 + TSS region transcription start site region 84811
Tssr84812 9 45852704 to 45852718 14 + TSS region transcription start site region 84812
Tssr84813 9 45852740 to 45852756 16 + TSS region transcription start site region 84813
Gm16536 9 45856769 to 45858357 1588 - antisense lncRNA gene predicted gene 16536
Gm49338 9 45858604 to 45860682 2078 - unclassified gene predicted gene, 49338
Tssr84814 9 45858624 to 45858630 6 + TSS region transcription start site region 84814
Rnf214 9 45863425 to 45906911 43486 - protein coding gene ring finger protein 214
Tssr2848 9 45868890 to 45868895 5 + TSS region transcription start site region 2848
Gm24646 9 45879550 to 45879648 98 - snRNA gene predicted gene, 24646
Tssr89272 9 45900259 to 45900263 4 - TSS region transcription start site region 89272
Cpgi21697 9 45905701 to 45907374 1673 CpG island CpG island 21697
Tssr89273 9 45906369 to 45906437 68 - TSS region transcription start site region 89273
Pcsk7 9 45906497 to 45929726 23229 + protein coding gene proprotein convertase subtilisin/kexin type 7
Tssr84815 9 45906513 to 45906552 39 + TSS region transcription start site region 84815
Tssr89274 9 45906837 to 45906894 57 - TSS region transcription start site region 89274
Tssr89275 9 45906898 to 45906921 23 - TSS region transcription start site region 89275
Tssr84816 9 45906925 to 45907013 88 + TSS region transcription start site region 84816
Tssr89276 9 45907585 to 45907589 4 - TSS region transcription start site region 89276
Tagln 9 45929628 to 45936058 6430 - protein coding gene transgelin
Gm48529 9 45930112 to 45933738 3626 + antisense lncRNA gene predicted gene, 48529
Tssr84817 9 45930356 to 45930367 11 + TSS region transcription start site region 84817
Tssr89277 9 45930388 to 45930410 22 - TSS region transcription start site region 89277
Tssr89278 9 45930458 to 45930471 13 - TSS region transcription start site region 89278
Tssr89279 9 45935887 to 45935903 16 - TSS region transcription start site region 89279
Tssr89280 9 45936049 to 45936106 57 - TSS region transcription start site region 89280