Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45274100-45392581

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr84759 9 45274893 to 45274906 13 + TSS region transcription start site region 84759
Tssr84760 9 45281094 to 45281134 40 + TSS region transcription start site region 84760
Tssr2847 9 45293243 to 45293244 1 + TSS region transcription start site region 2847
Tssr84761 9 45299405 to 45299436 31 + TSS region transcription start site region 84761
Cpgi21689 9 45300515 to 45300851 336 CpG island CpG island 21689
Gm47964 9 45301962 to 45302171 209 + pseudogene predicted gene, 47964
D9Mit69 9 45308095 to 45308273 178 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 69
Lncbate3 9 45318266 to 45322079 3813 - antisense lncRNA gene brown adipose tissue enriched long noncoding RNA 3
Tssr84762 9 45318982 to 45319019 37 + TSS region transcription start site region 84762
Tssr84763 9 45319021 to 45319062 41 + TSS region transcription start site region 84763
Tssr84764 9 45319072 to 45319086 14 + TSS region transcription start site region 84764
Tmprss13 9 45319100 to 45347581 28481 + protein coding gene transmembrane protease, serine 13
Tssr84765 9 45328494 to 45328508 14 + TSS region transcription start site region 84765
Tssr84766 9 45346804 to 45346807 3 + TSS region transcription start site region 84766
Tssr84767 9 45370003 to 45370019 16 + TSS region transcription start site region 84767
Tssr84768 9 45370092 to 45370109 17 + TSS region transcription start site region 84768
Cpgi21690 9 45370118 to 45371077 959 CpG island CpG island 21690
Fxyd6 9 45370185 to 45396159 25974 + protein coding gene FXYD domain-containing ion transport regulator 6
Tssr84769 9 45370199 to 45370208 9 + TSS region transcription start site region 84769
Tssr84770 9 45370212 to 45370282 70 + TSS region transcription start site region 84770
Tssr84771 9 45370397 to 45370463 66 + TSS region transcription start site region 84771
Tssr84772 9 45371638 to 45371655 17 + TSS region transcription start site region 84772
Tssr84773 9 45371706 to 45371731 25 + TSS region transcription start site region 84773
Tssr84774 9 45379897 to 45379903 6 + TSS region transcription start site region 84774
Tssr84775 9 45389877 to 45389882 5 + TSS region transcription start site region 84775
Tssr84776 9 45389891 to 45389906 15 + TSS region transcription start site region 84776
Tssr84777 9 45389918 to 45389926 8 + TSS region transcription start site region 84777
Tssr84778 9 45390747 to 45390763 16 + TSS region transcription start site region 84778
Tssr84779 9 45390793 to 45390808 15 + TSS region transcription start site region 84779