MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:4521160-5071195

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gria4	9	4417896 to 4796234	378338	-	protein coding gene	glutamate receptor, ionotropic, AMPA4 (alpha 4)
Gm46101	9	4513388 to 4532927	19539	+	lncRNA gene	predicted gene, 46101
Tssr88039	9	4635267 to 4635271	4	-	TSS region	transcription start site region 88039
Tssr88040	9	4765243 to 4765247	4	-	TSS region	transcription start site region 88040
Cpgi21336	9	4795545 to 4796457	912		CpG island	CpG island 21336
Tssr88041	9	4795561 to 4795644	83	-	TSS region	transcription start site region 88041
Tssr88042	9	4795914 to 4795928	14	-	TSS region	transcription start site region 88042
Tssr88043	9	4795951 to 4795964	13	-	TSS region	transcription start site region 88043
Tssr88044	9	4795969 to 4795987	18	-	TSS region	transcription start site region 88044
Tssr88045	9	4796022 to 4796033	11	-	TSS region	transcription start site region 88045
Tssr88046	9	4796034 to 4796066	32	-	TSS region	transcription start site region 88046
Tssr88047	9	4796070 to 4796081	11	-	TSS region	transcription start site region 88047
Tssr88048	9	4796141 to 4796159	18	-	TSS region	transcription start site region 88048
Tssr88049	9	4796160 to 4796195	35	-	TSS region	transcription start site region 88049
Tssr88050	9	4796196 to 4796216	20	-	TSS region	transcription start site region 88050
Tssr88051	9	4796218 to 4796267	49	-	TSS region	transcription start site region 88051
Gm46100	9	4796337 to 4800157	3820	+	lncRNA gene	predicted gene, 46100
Cpgi21337	9	4977605 to 4977809	204		CpG island	CpG island 21337
Gm7390	9	4977959 to 4979174	1215	+	pseudogene	predicted gene 7390