Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45144987-45234991

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scn4b 9 45139042 to 45154061 15019 + protein coding gene sodium channel, type IV, beta
Cpgi21686 9 45145686 to 45146181 495 CpG island CpG island 21686
Tssr84752 9 45152936 to 45152939 3 + TSS region transcription start site region 84752
Gm39327 9 45167053 to 45169180 2127 - lincRNA gene predicted gene, 39327
Tmprss4 9 45172726 to 45204092 31366 - protein coding gene transmembrane protease, serine 4
Gm17099 9 45172997 to 45175161 2164 + antisense lncRNA gene predicted gene 17099
Tssr84753 9 45189491 to 45189514 23 + TSS region transcription start site region 84753
Tssr84754 9 45189987 to 45189991 4 + TSS region transcription start site region 84754
BC049352 9 45195217 to 45251370 56153 + protein coding gene cDNA sequence BC049352
Tssr89246 9 45204024 to 45204048 24 - TSS region transcription start site region 89246
Tssr89247 9 45204067 to 45204077 10 - TSS region transcription start site region 89247
Tssr89248 9 45204083 to 45204106 23 - TSS region transcription start site region 89248
D9Mit68 9 45232548 to 45232683 135 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 68