Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45129987-45249991

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm10684 9 45107176 to 45135606 28430 - lincRNA gene predicted gene 10684
Scn2b 9 45117876 to 45130070 12194 + protein coding gene sodium channel, voltage-gated, type II, beta
Cpgi21685 9 45137949 to 45139281 1332 CpG island CpG island 21685
Tssr84734 9 45138296 to 45138305 9 + TSS region transcription start site region 84734
Tssr84735 9 45138314 to 45138321 7 + TSS region transcription start site region 84735
Tssr84736 9 45138390 to 45138403 13 + TSS region transcription start site region 84736
Tssr84737 9 45138457 to 45138462 5 + TSS region transcription start site region 84737
Tssr84738 9 45138528 to 45138537 9 + TSS region transcription start site region 84738
Tssr84739 9 45138540 to 45138549 9 + TSS region transcription start site region 84739
Tssr84740 9 45138550 to 45138561 11 + TSS region transcription start site region 84740
Tssr84741 9 45138576 to 45138594 18 + TSS region transcription start site region 84741
Tssr84742 9 45138600 to 45138613 13 + TSS region transcription start site region 84742
Tssr84743 9 45138616 to 45138631 15 + TSS region transcription start site region 84743
Tssr84744 9 45138747 to 45138758 11 + TSS region transcription start site region 84744
Tssr84745 9 45138762 to 45138769 7 + TSS region transcription start site region 84745
Tssr84746 9 45138791 to 45138798 7 + TSS region transcription start site region 84746
Tssr84747 9 45138800 to 45138840 40 + TSS region transcription start site region 84747
Tssr84748 9 45138864 to 45138880 16 + TSS region transcription start site region 84748
Tssr84749 9 45138882 to 45138898 16 + TSS region transcription start site region 84749
Tssr84750 9 45138899 to 45138918 19 + TSS region transcription start site region 84750
Tssr84751 9 45138929 to 45138939 10 + TSS region transcription start site region 84751
Scn4b 9 45139042 to 45154061 15019 + protein coding gene sodium channel, type IV, beta
Cpgi21686 9 45145686 to 45146181 495 CpG island CpG island 21686
Tssr84752 9 45152936 to 45152939 3 + TSS region transcription start site region 84752
Gm39327 9 45167053 to 45169180 2127 - lincRNA gene predicted gene, 39327
Tmprss4 9 45172726 to 45204092 31366 - protein coding gene transmembrane protease, serine 4
Gm17099 9 45172997 to 45175161 2164 + antisense lncRNA gene predicted gene 17099
Tssr84753 9 45189491 to 45189514 23 + TSS region transcription start site region 84753
Tssr84754 9 45189987 to 45189991 4 + TSS region transcription start site region 84754
BC049352 9 45195217 to 45251370 56153 + protein coding gene cDNA sequence BC049352
Tssr89246 9 45204024 to 45204048 24 - TSS region transcription start site region 89246
Tssr89247 9 45204067 to 45204077 10 - TSS region transcription start site region 89247
Tssr89248 9 45204083 to 45204106 23 - TSS region transcription start site region 89248
D9Mit68 9 45232548 to 45232683 135 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 68
Tssr89249 9 45245511 to 45245546 35 - TSS region transcription start site region 89249
Tssr84755 9 45245639 to 45245683 44 + TSS region transcription start site region 84755
Tssr89250 9 45246174 to 45246178 4 - TSS region transcription start site region 89250
Tssr84756 9 45246318 to 45246342 24 + TSS region transcription start site region 84756
Tssr84757 9 45246371 to 45246399 28 + TSS region transcription start site region 84757
Tssr89251 9 45249978 to 45250003 25 - TSS region transcription start site region 89251