Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:44903127-44985600

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atp5l	9	44913248 to 44920742	7494	-	protein coding gene	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
Tssr84703	9	44920190 to 44920218	28	+	TSS region	transcription start site region 84703
Cpgi21678	9	44920230 to 44920961	731		CpG island	CpG island 21678
Tssr89212	9	44920698 to 44920725	27	-	TSS region	transcription start site region 89212
Gm30934	9	44920840 to 44921442	602	+	antisense lncRNA gene	predicted gene, 30934
Ube4a	9	44923127 to 44965600	42473	-	protein coding gene	ubiquitination factor E4A
Tssr89213	9	44925655 to 44925669	14	-	TSS region	transcription start site region 89213
Tssr89214	9	44945929 to 44945937	8	-	TSS region	transcription start site region 89214
Gm19121	9	44955715 to 44956736	1021	+	pseudogene	predicted gene, 19121
Cpgi21679	9	44965244 to 44965770	526		CpG island	CpG island 21679
Tssr89215	9	44965519 to 44965586	67	-	TSS region	transcription start site region 89215
Cd3g	9	44969572 to 44980431	10859	-	protein coding gene	CD3 antigen, gamma polypeptide
Tssr89216	9	44969771 to 44969774	3	-	TSS region	transcription start site region 89216
Tssr89217	9	44974239 to 44974250	11	-	TSS region	transcription start site region 89217
Tssr89218	9	44974345 to 44974359	14	-	TSS region	transcription start site region 89218
D9Mit255a	9	44979756 to 44979850	94		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 255a
D9Mit255b	9	44979796 to 44979850	54		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 255b
Tssr89219	9	44980330 to 44980341	11	-	TSS region	transcription start site region 89219
Tssr89220	9	44980342 to 44980369	27	-	TSS region	transcription start site region 89220
Tssr89221	9	44980390 to 44980437	47	-	TSS region	transcription start site region 89221
Tssr89222	9	44980439 to 44980455	16	-	TSS region	transcription start site region 89222
Tssr84704	9	44980536 to 44980558	22	+	TSS region	transcription start site region 84704
Cd3d	9	44981769 to 44987052	5283	+	protein coding gene	CD3 antigen, delta polypeptide
Tssr84705	9	44981779 to 44981798	19	+	TSS region	transcription start site region 84705
Tssr84706	9	44981801 to 44981834	33	+	TSS region	transcription start site region 84706
Tssr84707	9	44981847 to 44981864	17	+	TSS region	transcription start site region 84707
Tssr84708	9	44983659 to 44983663	4	+	TSS region	transcription start site region 84708
Tssr84709	9	44985435 to 44985454	19	+	TSS region	transcription start site region 84709