Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Upk2 | 9 | 2052 | - | protein coding gene | uroplakin 2 | |
Tssr89161 | 9 | 11 | - | TSS region | transcription start site region 89161 | |
Tssr89162 | 9 | 12 | - | TSS region | transcription start site region 89162 | |
Tssr89163 | 9 | 16 | - | TSS region | transcription start site region 89163 | |
Gm9830 | 9 | 356 | + | pseudogene | predicted gene 9830 | |
C030014I23Rik | 9 | 10546 | + | lincRNA gene | RIKEN cDNA C030014I23 gene | |
Gm22540 | 9 | 116 | - | snRNA gene | predicted gene, 22540 | |
Gm47204 | 9 | 1831 | - | lincRNA gene | predicted gene, 47204 | |
Cpgi21659 | 9 | 294 | CpG island | CpG island 21659 | ||
Cpgi21660 | 9 | 337 | CpG island | CpG island 21660 | ||
Tssr89164 | 9 | 19 | - | TSS region | transcription start site region 89164 | |
Tssr89165 | 9 | 28 | - | TSS region | transcription start site region 89165 | |
Cpgi21661 | 9 | 394 | CpG island | CpG island 21661 | ||
Gm47205 | 9 | 2289 | - | unclassified gene | predicted gene, 47205 | |
Cpgi21662 | 9 | 1216 | CpG island | CpG island 21662 | ||
Tssr84666 | 9 | 21 | + | TSS region | transcription start site region 84666 | |
Tssr84667 | 9 | 39 | + | TSS region | transcription start site region 84667 | |
Tssr84668 | 9 | 32 | + | TSS region | transcription start site region 84668 | |
Bcl9l | 9 | 29071 | + | protein coding gene | B cell CLL/lymphoma 9-like | |
Tssr84669 | 9 | 25 | + | TSS region | transcription start site region 84669 | |
Tssr84670 | 9 | 16 | + | TSS region | transcription start site region 84670 | |
Tssr84671 | 9 | 36 | + | TSS region | transcription start site region 84671 | |
Tssr84672 | 9 | 35 | + | TSS region | transcription start site region 84672 | |
Cpgi21663 | 9 | 512 | CpG island | CpG island 21663 | ||
Tssr84673 | 9 | 9 | + | TSS region | transcription start site region 84673 | |
Tssr2843 | 9 | 34 | + | TSS region | transcription start site region 2843 | |
Cpgi21664 | 9 | 953 | CpG island | CpG island 21664 | ||
Tssr84674 | 9 | 33 | + | TSS region | transcription start site region 84674 | |
Cpgi21665 | 9 | 251 | CpG island | CpG island 21665 | ||
Tssr89166 | 9 | 9 | - | TSS region | transcription start site region 89166 | |
Cxcr5 | 9 | 14634 | - | protein coding gene | chemokine (C-X-C motif) receptor 5 | |
Cpgi21666 | 9 | 588 | CpG island | CpG island 21666 | ||
Tssr84675 | 9 | 31 | + | TSS region | transcription start site region 84675 | |
Tssr89167 | 9 | 4 | - | TSS region | transcription start site region 89167 | |
Tssr89168 | 9 | 26 | - | TSS region | transcription start site region 89168 | |
Tssr89169 | 9 | 16 | - | TSS region | transcription start site region 89169 | |
Tssr89170 | 9 | 32 | - | TSS region | transcription start site region 89170 | |
Tssr89171 | 9 | 11 | - | TSS region | transcription start site region 89171 | |
Tssr89172 | 9 | 27 | - | TSS region | transcription start site region 89172 | |
Tssr89173 | 9 | 5 | - | TSS region | transcription start site region 89173 | |
Tssr89174 | 9 | 7 | - | TSS region | transcription start site region 89174 | |
Tssr89175 | 9 | 12 | - | TSS region | transcription start site region 89175 | |
Tssr2844 | 9 | 1 | - | TSS region | transcription start site region 2844 | |
Tssr89176 | 9 | 45 | - | TSS region | transcription start site region 89176 | |
Tssr89177 | 9 | 12 | - | TSS region | transcription start site region 89177 | |
Gm47230 | 9 | 5044 | + | lincRNA gene | predicted gene, 47230 | |
Tssr84676 | 9 | 13 | + | TSS region | transcription start site region 84676 | |
Tssr89178 | 9 | 14 | - | TSS region | transcription start site region 89178 | |
Tssr84677 | 9 | 25 | + | TSS region | transcription start site region 84677 | |
Tssr84678 | 9 | 20 | + | TSS region | transcription start site region 84678 | |
Tssr84679 | 9 | 12 | + | TSS region | transcription start site region 84679 | |
Tssr89179 | 9 | 6 | - | TSS region | transcription start site region 89179 | |
Cpgi21667 | 9 | 222 | CpG island | CpG island 21667 | ||
Gm47231 | 9 | 1455 | - | lincRNA gene | predicted gene, 47231 | |
Gm47232 | 9 | 865 | - | lincRNA gene | predicted gene, 47232 | |
Cpgi21668 | 9 | 180 | CpG island | CpG island 21668 | ||
Tssr89180 | 9 | 10 | - | TSS region | transcription start site region 89180 | |
Tssr89181 | 9 | 21 | - | TSS region | transcription start site region 89181 | |
Tssr84680 | 9 | 25 | + | TSS region | transcription start site region 84680 | |
Tssr84681 | 9 | 14 | + | TSS region | transcription start site region 84681 | |
Cpgi21669 | 9 | 1707 | CpG island | CpG island 21669 | ||
Tssr84682 | 9 | 15 | + | TSS region | transcription start site region 84682 | |
Tssr89182 | 9 | 7 | - | TSS region | transcription start site region 89182 | |
Tssr84683 | 9 | 36 | + | TSS region | transcription start site region 84683 | |
Tssr2845 | 9 | 5 | + | TSS region | transcription start site region 2845 | |
Tssr89183 | 9 | 15 | - | TSS region | transcription start site region 89183 | |
Tssr89184 | 9 | 37 | - | TSS region | transcription start site region 89184 | |
Tssr84684 | 9 | 77 | + | TSS region | transcription start site region 84684 | |
Ddx6 | 9 | 35839 | + | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | |
Tssr84685 | 9 | 17 | + | TSS region | transcription start site region 84685 | |
Tssr89185 | 9 | 27 | - | TSS region | transcription start site region 89185 | |
Tssr84686 | 9 | 5 | + | TSS region | transcription start site region 84686 | |
Tssr84687 | 9 | 6 | + | TSS region | transcription start site region 84687 | |
Tssr84688 | 9 | 9 | + | TSS region | transcription start site region 84688 | |
Gm30671 | 9 | 317 | - | pseudogene | predicted gene, 30671 | |
E030022I16Rik | 9 | 2765 | + | unclassified non-coding RNA gene | RIKEN cDNA E030022I16 gene | |
Tssr84689 | 9 | 4 | + | TSS region | transcription start site region 84689 | |
Gm47234 | 9 | 908 | + | unclassified gene | predicted gene, 47234 | |
Tssr84690 | 9 | 7 | + | TSS region | transcription start site region 84690 | |
Tssr84691 | 9 | 10 | + | TSS region | transcription start site region 84691 | |
Tssr84692 | 9 | 3 | + | TSS region | transcription start site region 84692 | |
Tssr89186 | 9 | 49 | - | TSS region | transcription start site region 89186 | |
Gm47238 | 9 | 1231 | + | pseudogene | predicted gene, 47238 | |
Gm3953 | 9 | 788 | - | pseudogene | predicted gene 3953 | |
BC049987 | 9 | 1785 | - | lincRNA gene | cDNA sequence BC049987 | |
Tssr89187 | 9 | 6 | - | TSS region | transcription start site region 89187 | |
Tssr84693 | 9 | 3 | + | TSS region | transcription start site region 84693 | |
Tssr84694 | 9 | 19 | + | TSS region | transcription start site region 84694 | |
Treh | 9 | 13072 | + | protein coding gene | trehalase (brush-border membrane glycoprotein) | |
Phldb1 | 9 | 48894 | - | protein coding gene | pleckstrin homology like domain, family B, member 1 | |
Cpgi21670 | 9 | 777 | CpG island | CpG island 21670 | ||
Gm47239 | 9 | 703 | + | unclassified gene | predicted gene, 47239 | |
Tssr89188 | 9 | 22 | - | TSS region | transcription start site region 89188 | |
Cpgi21671 | 9 | 895 | CpG island | CpG island 21671 | ||
Tssr89189 | 9 | 3 | - | TSS region | transcription start site region 89189 | |
Tssr84695 | 9 | 44 | + | TSS region | transcription start site region 84695 | |
Cpgi21672 | 9 | 513 | CpG island | CpG island 21672 | ||
Tssr89190 | 9 | 52 | - | TSS region | transcription start site region 89190 | |
Tssr89191 | 9 | 101 | - | TSS region | transcription start site region 89191 | |
Cpgi21673 | 9 | 1731 | CpG island | CpG island 21673 | ||
Tssr84696 | 9 | 15 | + | TSS region | transcription start site region 84696 | |
Tssr89192 | 9 | 12 | - | TSS region | transcription start site region 89192 | |
Tssr89193 | 9 | 11 | - | TSS region | transcription start site region 89193 | |
Tssr89194 | 9 | 3 | - | TSS region | transcription start site region 89194 | |
Tssr89195 | 9 | 24 | - | TSS region | transcription start site region 89195 | |
Tssr89196 | 9 | 24 | - | TSS region | transcription start site region 89196 | |
Gm24166 | 9 | 134 | - | snoRNA gene | predicted gene, 24166 | |
Arcn1 | 9 | 25665 | - | protein coding gene | archain 1 | |
Tssr89197 | 9 | 40 | - | TSS region | transcription start site region 89197 | |
Gm48562 | 9 | 747 | - | unclassified gene | predicted gene, 48562 | |
Cpgi21674 | 9 | 919 | CpG island | CpG island 21674 | ||
Tssr2846 | 9 | 24 | + | TSS region | transcription start site region 2846 | |
Tssr89198 | 9 | 46 | - | TSS region | transcription start site region 89198 | |
Tssr89199 | 9 | 11 | - | TSS region | transcription start site region 89199 | |
Cpgi21675 | 9 | 396 | CpG island | CpG island 21675 | ||
Tssr84697 | 9 | 40 | + | TSS region | transcription start site region 84697 | |
Ift46 | 9 | 19799 | + | protein coding gene | intraflagellar transport 46 | |
Tssr84698 | 9 | 13 | + | TSS region | transcription start site region 84698 | |
Tssr84699 | 9 | 5 | + | TSS region | transcription start site region 84699 | |
Tssr84700 | 9 | 27 | + | TSS region | transcription start site region 84700 | |
Tssr84701 | 9 | 40 | + | TSS region | transcription start site region 84701 | |
Tssr84702 | 9 | 16 | + | TSS region | transcription start site region 84702 | |
Tmem25 | 9 | 5499 | - | protein coding gene | transmembrane protein 25 | |
Cpgi21676 | 9 | 1133 | CpG island | CpG island 21676 | ||
Tssr89200 | 9 | 76 | - | TSS region | transcription start site region 89200 | |
Gm48702 | 9 | 3580 | + | antisense lncRNA gene | predicted gene, 48702 | |
Ttc36 | 9 | 3551 | - | protein coding gene | tetratricopeptide repeat domain 36 | |
Tssr89201 | 9 | 13 | - | TSS region | transcription start site region 89201 | |
Tssr89202 | 9 | 15 | - | TSS region | transcription start site region 89202 | |
Tssr89203 | 9 | 41 | - | TSS region | transcription start site region 89203 | |
Tssr89204 | 9 | 43 | - | TSS region | transcription start site region 89204 | |
Tssr89205 | 9 | 9 | - | TSS region | transcription start site region 89205 | |
Tssr89206 | 9 | 28 | - | TSS region | transcription start site region 89206 | |
Kmt2a | 9 | 77941 | - | protein coding gene | lysine (K)-specific methyltransferase 2A | |
Gm48314 | 9 | 2738 | - | unclassified gene | predicted gene, 48314 | |
Tssr89207 | 9 | 3 | - | TSS region | transcription start site region 89207 | |
Gm30816 | 9 | 14022 | + | lncRNA gene | predicted gene, 30816 | |
Tssr89208 | 9 | 7 | - | TSS region | transcription start site region 89208 | |
Tssr89209 | 9 | 4 | - | TSS region | transcription start site region 89209 | |
Gm46109 | 9 | 578 | + | lncRNA gene | predicted gene, 46109 | |
Cpgi21677 | 9 | 2972 | CpG island | CpG island 21677 | ||
Gm39326 | 9 | 5967 | + | antisense lncRNA gene | predicted gene, 39326 | |
Tssr89210 | 9 | 46 | - | TSS region | transcription start site region 89210 | |
Tssr89211 | 9 | 36 | - | TSS region | transcription start site region 89211 | |
Gm30883 | 9 | 4381 | - | lncRNA gene | predicted gene, 30883 | |
Gm26249 | 9 | 117 | + | snRNA gene | predicted gene, 26249 | |
Atp5l | 9 | 7494 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G | |
Tssr84703 | 9 | 28 | + | TSS region | transcription start site region 84703 | |
Cpgi21678 | 9 | 731 | CpG island | CpG island 21678 | ||
Tssr89212 | 9 | 27 | - | TSS region | transcription start site region 89212 | |
Gm30934 | 9 | 602 | + | antisense lncRNA gene | predicted gene, 30934 | |
Ube4a | 9 | 42473 | - | protein coding gene | ubiquitination factor E4A | |
Tssr89213 | 9 | 14 | - | TSS region | transcription start site region 89213 | |
Tssr89214 | 9 | 8 | - | TSS region | transcription start site region 89214 | |
Gm19121 | 9 | 1021 | + | pseudogene | predicted gene, 19121 | |
Cpgi21679 | 9 | 526 | CpG island | CpG island 21679 | ||
Tssr89215 | 9 | 67 | - | TSS region | transcription start site region 89215 | |
Cd3g | 9 | 10859 | - | protein coding gene | CD3 antigen, gamma polypeptide | |
Tssr89216 | 9 | 3 | - | TSS region | transcription start site region 89216 | |
Tssr89217 | 9 | 11 | - | TSS region | transcription start site region 89217 | |
Tssr89218 | 9 | 14 | - | TSS region | transcription start site region 89218 | |
D9Mit255a | 9 | 94 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 255a | ||
D9Mit255b | 9 | 54 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 255b | ||
Tssr89219 | 9 | 11 | - | TSS region | transcription start site region 89219 | |
Tssr89220 | 9 | 27 | - | TSS region | transcription start site region 89220 | |
Tssr89221 | 9 | 47 | - | TSS region | transcription start site region 89221 | |
Tssr89222 | 9 | 16 | - | TSS region | transcription start site region 89222 | |
Tssr84704 | 9 | 22 | + | TSS region | transcription start site region 84704 | |
Cd3d | 9 | 5283 | + | protein coding gene | CD3 antigen, delta polypeptide | |
Tssr84705 | 9 | 19 | + | TSS region | transcription start site region 84705 | |
Tssr84706 | 9 | 33 | + | TSS region | transcription start site region 84706 | |
Tssr84707 | 9 | 17 | + | TSS region | transcription start site region 84707 | |
Tssr84708 | 9 | 4 | + | TSS region | transcription start site region 84708 | |
Tssr84709 | 9 | 19 | + | TSS region | transcription start site region 84709 | |
Tssr89223 | 9 | 18 | - | TSS region | transcription start site region 89223 | |
D9Mit23 | 9 | 206 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 23 | ||
Tssr89224 | 9 | 14 | - | TSS region | transcription start site region 89224 | |
Tssr89225 | 9 | 15 | - | TSS region | transcription start site region 89225 | |
Cpgi21680 | 9 | 262 | CpG island | CpG island 21680 | ||
Cd3e | 9 | 10887 | - | protein coding gene | CD3 antigen, epsilon polypeptide | |
Tssr89226 | 9 | 11 | - | TSS region | transcription start site region 89226 | |
Tssr89227 | 9 | 31 | - | TSS region | transcription start site region 89227 | |
Tssr89228 | 9 | 28 | - | TSS region | transcription start site region 89228 | |
Tssr89229 | 9 | 31 | - | TSS region | transcription start site region 89229 | |
Tssr89230 | 9 | 36 | - | TSS region | transcription start site region 89230 | |
Tssr89231 | 9 | 24 | - | TSS region | transcription start site region 89231 | |
Tssr89232 | 9 | 15 | - | TSS region | transcription start site region 89232 | |
Tssr89233 | 9 | 11 | - | TSS region | transcription start site region 89233 | |
Gm48719 | 9 | 3556 | + | antisense lncRNA gene | predicted gene, 48719 | |
Tssr84710 | 9 | 17 | + | TSS region | transcription start site region 84710 | |
Tssr89234 | 9 | 20 | - | TSS region | transcription start site region 89234 | |
Tssr89235 | 9 | 33 | - | TSS region | transcription start site region 89235 | |
Tssr89236 | 9 | 30 | - | TSS region | transcription start site region 89236 |