Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:44355214-44395238

Filter by:
16 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps11 9 44347749 to 44361670 13921 - protein coding gene VPS11, CORVET/HOPS core subunit
Cpgi21653 9 44361276 to 44361918 642 CpG island CpG island 21653
Tssr89147 9 44361625 to 44361670 45 - TSS region transcription start site region 89147
Gm22141 9 44363452 to 44363728 276 + unclassified non-coding RNA gene predicted gene, 22141
Gm40516 9 44364580 to 44365266 686 - lncRNA gene predicted gene, 40516
Gm10080 9 44374744 to 44375181 437 - pseudogene predicted gene 10080
Tssr89148 9 44375214 to 44375238 24 - TSS region transcription start site region 89148
9430081H08Rik 9 44378633 to 44379450 817 - lncRNA gene RIKEN cDNA 9430081H08 gene
Cpgi21654 9 44378990 to 44380188 1198 CpG island CpG island 21654
Tssr2842 9 44379182 to 44379193 11 - TSS region transcription start site region 2842
Tssr89149 9 44379260 to 44379352 92 - TSS region transcription start site region 89149
Hyou1 9 44379490 to 44392369 12879 + protein coding gene hypoxia up-regulated 1
Tssr84648 9 44379503 to 44379513 10 + TSS region transcription start site region 84648
Tssr84649 9 44379518 to 44379529 11 + TSS region transcription start site region 84649
Tssr84650 9 44379536 to 44379624 88 + TSS region transcription start site region 84650
Tssr84651 9 44392201 to 44392205 4 + TSS region transcription start site region 84651