Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:44343452-44383728

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hmbs	9	44336348 to 44344228	7880	-	protein coding gene	hydroxymethylbilane synthase
Cpgi21652	9	44343750 to 44344314	564		CpG island	CpG island 21652
Tssr89145	9	44344120 to 44344132	12	-	TSS region	transcription start site region 89145
Tssr89146	9	44344159 to 44344203	44	-	TSS region	transcription start site region 89146
Vps11	9	44347881 to 44361672	13791	-	protein coding gene	VPS11, CORVET/HOPS core subunit
Cpgi21653	9	44361276 to 44361918	642		CpG island	CpG island 21653
Tssr89147	9	44361625 to 44361670	45	-	TSS region	transcription start site region 89147
Gm22141	9	44363452 to 44363728	276	+	unclassified non-coding RNA gene	predicted gene, 22141
Gm40516	9	44364580 to 44365266	686	-	lncRNA gene	predicted gene, 40516
Gm10080	9	44374744 to 44375181	437	-	pseudogene	predicted gene 10080
Tssr89148	9	44375214 to 44375238	24	-	TSS region	transcription start site region 89148
9430081H08Rik	9	44378633 to 44379450	817	-	unclassified gene	RIKEN cDNA 9430081H08 gene
Cpgi21654	9	44378990 to 44380188	1198		CpG island	CpG island 21654
Tssr2842	9	44379182 to 44379193	11	-	TSS region	transcription start site region 2842
Tssr89149	9	44379260 to 44379352	92	-	TSS region	transcription start site region 89149
Hyou1	9	44379490 to 44392369	12879	+	protein coding gene	hypoxia up-regulated 1
Tssr84648	9	44379503 to 44379513	10	+	TSS region	transcription start site region 84648
Tssr84649	9	44379518 to 44379529	11	+	TSS region	transcription start site region 84649
Tssr84650	9	44379536 to 44379624	88	+	TSS region	transcription start site region 84650