Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:44141493-44251515

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adip20a 9 42779420 to 44142555 1363135 QTL adiposity 20a
Mcam 9 44134581 to 44142727 8146 + protein coding gene melanoma cell adhesion molecule
Tssr89112 9 44144527 to 44144548 21 - TSS region transcription start site region 89112
Tssr89113 9 44144713 to 44144733 20 - TSS region transcription start site region 89113
Cbl 9 44145040 to 44234046 89006 - protein coding gene Casitas B-lineage lymphoma
Tssr89114 9 44148243 to 44148278 35 - TSS region transcription start site region 89114
Tssr89115 9 44163420 to 44163430 10 - TSS region transcription start site region 89115
5830462O15Rik 9 44179047 to 44180701 1654 - unclassified gene RIKEN cDNA 5830462O15 gene
Gm47255 9 44180675 to 44181161 486 + pseudogene predicted gene, 47255
Tssr89116 9 44185398 to 44185401 3 - TSS region transcription start site region 89116
D9Ertd334e 9 44191734 to 44191949 215 DNA segment DNA segment, Chr 9, ERATO Doi 334, expressed
Tssr89117 9 44196116 to 44196120 4 - TSS region transcription start site region 89117
Tssr89118 9 44196493 to 44196515 22 - TSS region transcription start site region 89118
Tssr89119 9 44196523 to 44196556 33 - TSS region transcription start site region 89119
Cpgi21644 9 44233331 to 44234497 1166 CpG island CpG island 21644
Tssr89120 9 44233334 to 44233336 2 - TSS region transcription start site region 89120
Tssr89121 9 44233475 to 44233527 52 - TSS region transcription start site region 89121
Tssr89122 9 44233901 to 44233912 11 - TSS region transcription start site region 89122
Tssr89123 9 44233927 to 44233967 40 - TSS region transcription start site region 89123
Tssr89124 9 44233983 to 44234003 20 - TSS region transcription start site region 89124
Tssr89125 9 44234014 to 44234017 3 - TSS region transcription start site region 89125
Tssr89126 9 44234155 to 44234164 9 - TSS region transcription start site region 89126
Tssr84627 9 44234361 to 44234374 13 + TSS region transcription start site region 84627
Tssr89127 9 44236887 to 44236907 20 - TSS region transcription start site region 89127
Tssr84628 9 44240668 to 44240693 25 + TSS region transcription start site region 84628
Ccdc153 9 44240676 to 44247306 6630 + protein coding gene coiled-coil domain containing 153
Tssr84629 9 44240707 to 44240717 10 + TSS region transcription start site region 84629
Tssr84630 9 44240732 to 44240743 11 + TSS region transcription start site region 84630
Pdzd3 9 44247312 to 44251464 4152 - protein coding gene PDZ domain containing 3
Tssr89128 9 44251465 to 44251491 26 - TSS region transcription start site region 89128