Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:44052021-44110627

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49380 9 44066327 to 44113500 47173 - protein coding gene predicted gene, 49380
Gm39325 9 44066766 to 44071468 4702 - antisense lncRNA gene predicted gene, 39325
Cpgi21637 9 44066824 to 44067372 548 CpG island CpG island 21637
Tssr84599 9 44066966 to 44066988 22 + TSS region transcription start site region 84599
Tssr84600 9 44066993 to 44067024 31 + TSS region transcription start site region 84600
Usp2 9 44067021 to 44095627 28606 + protein coding gene ubiquitin specific peptidase 2
Tssr84601 9 44067041 to 44067059 18 + TSS region transcription start site region 84601
Tssr84602 9 44067072 to 44067134 62 + TSS region transcription start site region 84602
Tssr84603 9 44067139 to 44067153 14 + TSS region transcription start site region 84603
Tssr84604 9 44068149 to 44068165 16 + TSS region transcription start site region 84604
Tssr84605 9 44068203 to 44068210 7 + TSS region transcription start site region 84605
Tssr84606 9 44069421 to 44069452 31 + TSS region transcription start site region 84606
Tssr84607 9 44069462 to 44069478 16 + TSS region transcription start site region 84607
Tssr84608 9 44072196 to 44072211 15 + TSS region transcription start site region 84608
Tssr84609 9 44076120 to 44076151 31 + TSS region transcription start site region 84609
D9Mit228 9 44083235 to 44083375 140 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 228
Cpgi21638 9 44083648 to 44084029 381 CpG island CpG island 21638
Cpgi21639 9 44084445 to 44085621 1176 CpG island CpG island 21639
Tssr84610 9 44084914 to 44084933 19 + TSS region transcription start site region 84610
Tssr84611 9 44084944 to 44084957 13 + TSS region transcription start site region 84611
Tssr84612 9 44085029 to 44085047 18 + TSS region transcription start site region 84612
Tssr84613 9 44086201 to 44086202 1 + TSS region transcription start site region 84613
Tssr84614 9 44086206 to 44086219 13 + TSS region transcription start site region 84614
Tssr84615 9 44089094 to 44089135 41 + TSS region transcription start site region 84615
Tssr84616 9 44093865 to 44093885 20 + TSS region transcription start site region 84616
Gm38444 9 44095812 to 44099113 3301 - lncRNA gene predicted gene, 38444
Tssr84617 9 44101722 to 44101735 13 + TSS region transcription start site region 84617
Mfrp 9 44101770 to 44109187 7417 + protein coding gene membrane frizzled-related protein
Tssr84618 9 44102065 to 44102078 13 + TSS region transcription start site region 84618
Tssr84619 9 44107226 to 44107235 9 + TSS region transcription start site region 84619
C1qtnf5 9 44107245 to 44109187 1942 + protein coding gene C1q and tumor necrosis factor related protein 5
Tssr84620 9 44107268 to 44107279 11 + TSS region transcription start site region 84620
Tssr84621 9 44107286 to 44107355 69 + TSS region transcription start site region 84621
Gm20444 9 44107301 to 44108879 1578 - sense intronic lncRNA gene predicted gene 20444
Tssr84622 9 44107672 to 44107718 46 + TSS region transcription start site region 84622
Tssr84623 9 44107743 to 44107761 18 + TSS region transcription start site region 84623
Cpgi21640 9 44107813 to 44108570 757 CpG island CpG island 21640