Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:43805898-44006002

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nectin1	9	43744576 to 43807461	62885	+	protein coding gene	nectin cell adhesion molecule 1
D9Mit1007	9	43809795 to 43809937	142		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 1007
Gm3898	9	43829971 to 43832669	2698	+	lincRNA gene	predicted gene 3898
Cpgi21633	9	43864060 to 43864342	282		CpG island	CpG island 21633
Tssr84576	9	43869403 to 43869405	2	+	TSS region	transcription start site region 84576
Cpgi21634	9	43879800 to 43880522	722		CpG island	CpG island 21634
D9Mit129.1	9	43884995 to 43885104	109		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 129.1
D9Mit129	9	43885124 to 43885255	131		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 129
Stheal13	9	43885124 to 43885255	131		QTL	soft tissue heal 13
Hdlq17	9	43885124 to 43885255	131		QTL	HDL QTL 17
Mtbcq9	9	43885124 to 43885255	131		QTL	multiple trait body composition QTL 9
Gm39322	9	43887471 to 43888630	1159	-	lncRNA gene	predicted gene, 39322
D9Ertd596e	9	43892064 to 43892314	250		DNA segment	DNA segment, Chr 9, ERATO Doi 596, expressed
Gm23326	9	43905898 to 43906002	104	-	snRNA gene	predicted gene, 23326
Gm30373	9	43960966 to 43974170	13204	-	lincRNA gene	predicted gene, 30373
Gm10688	9	43978958 to 43979477	519	-	lincRNA gene	predicted gene 10688
Tssr84577	9	43993982 to 43993993	11	+	TSS region	transcription start site region 84577
E230034D01Rik	9	43993984 to 44000673	6689	+	unclassified non-coding RNA gene	RIKEN cDNA E230034D01 gene
Gm47345	9	43996471 to 43998593	2122	-	unclassified gene	predicted gene, 47345